YALI0D22748g

Overview

Description weakly similar to uniprot|O42947 Schizosaccharomyces pombe Hypothetical protein
Locus type CDS
Locus tag YALI0D22748g

Location

Species Yarrowia lipolytica Positions 2938275..2941113
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2839 (nuc.)
Previous locus YALI0D22715g Next locus YALI0D22770g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22748g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22748gYALI0D22748g_mRNA-001YALI0D22748g_CDS-001

Nucleotide sequence

 

>YALI0D22748g
ATGAGTTCCAAACCGCACGTGTCTGTGTTGCCCGTGCAAGGCAGCCGCATTTTATGCGTT
GCCGACGCCCGCGGTAATCTTTCCATGCTCAACGAGTTGGCCAAGGAGCACAACGCGACT
TGTGTGATTCATATCGGCACGTTTGGTTTTCTGGATAATGAGACAGTAGAGAGTGCTCCA
GCAGGGTGAGTATTCCGGGCGGGAGCGCAGCGAGCGCTGGTTGAAGTCTGAACACGGATT
GTTCGGATGGGTTTCTTGTTTTTCCTTCTTCCCCCATTTCAGTTACAAGGTCGGGTGGTG
TTTTTGTCTGCATTGTGTTGTCAAGTGTTTGTGTAATCATGTGTCTGTGTCACCACCTTA
CTTTGGGTGGCGAACCACGACTCGGGGGATGTGTCCCCGGACTGGTGGATGAGTGGCAAG
GACAGGGTAGCAATTTCGCGCCCTGCTGTTCGCCACTCGCACACCAAGACACAGGTACAC
ACAATTCGACACAGACACCATACAGACACCCCACAATGACAATGACAGACACGTCACTTG
ACGCCGACACGGTTCTGTTGATGCTTTGATATCGACAAGCATGCAATTCCTCAGACGTAG
CTGTTGCTATAGCTGCCACTAACGGTGGCGTTGTGATGACGACTCTGTGACGTACGAATA
GGCGGAGATGTCACGGACACAGATACAGACACAGATACAGATGCCTGTGTTTTCAGGGGG
ACGGGAAATCACTGATGCTTCCTTGAATGGTGTCTCCTGCGTCACTCCCACTCGCGAACA
GTTCATATGCTCTCATCATGACACTCTCAGATACACCGCTCAAACCCGGCAAGTCCAGTC
CCTCTTACTGCCTTCATAGTCGTTCAGCCCACGGTCCCCATATGCTCACCGGTCTATGCA
GTTCACTAATGTGAAACGAGGGCTTATGCAATGTATGCGCAATCAATTGAGCTGGTCGTG
TGAGGGGTCTGGTGAGTTGAATTGTGCATGTGGGATACCCGGTGACCTCTACCCGATAGA
TGTGTGATACGTCCAGCATAAGCACATCACAATACACCCGTTGCAGAGCATTTTTCACTA
AATACTCCTCGTATCTGTCATCCTGTTGTTTTGTTTTTTTTTGTTTTTTTTTTAGGGGTT
TACTCGACCTCAGGATCTCTTACAGGTCGGCTTGTCCACCCGTCACTTCTGCTAACCCAG
TCTTCTTCGTCACCTAGCATTCTTTTCCCCCAAACTTGACCCCACATCCCTCCCATCCGA
GGAAGACGCGGACATTCGTAAGTTCCTCAAGTCCCAGTCCCCAGACACATCGACCTGTCT
CCTGTCCGAACTCCCCGAGTTTATTTCCGGCGCCAAACGTCTCGCTGTCCCAGTTTACAC
CATCTGGGGCTCGTCCGAGGATGTGCGAGTGGTAGAAAAGTTTGCCAGCAGCGAACTCCA
CGTCCCCAACCTGCACATTGTTGGCTTGGCGTCGGACACCCCCTGCCCGCTGATCACATG
CCCTGGGGGGCTCAAGATCCGTCTTCTCGGTCTCGGAGGCGCGTTCATCGTGCCCAAGTT
GCTGGACCACGGCGCGTCGATGACATCCAGCATAGGCGGCATGGTCGGCGCAACATGGTC
AACGCTGCTGGGCGTGGGCGAGCTGCTGTGCAACGTGCGCGACACTTACGCGGTCGACGA
GATCCGTGTCTTCCTCTGCCACAATTCGCCGCTCAAGGAGGAGTTGCTGTGCCACTTGGC
GCACACTCTGCGGGCCGACTACGTCATCTGCGGTGGGCTGCATTTCTTCTACGGGCTCAG
TTTCAACCACTTTGCGGTCACGCCCAGCTTTGAGACGTATGTGAGCGCTCTGGGCCAGCG
GTCCGCGGCCTTTGCTGCAGTGTGGCAGCGTCTGCGACACAGCAACGATCTCACGTCATT
GACGCCGCAGAAACTCGAGTTACTGGACCTAGCGGCCAACATCTTTCTGACAGTGCCTCG
GCTCAAGGACGAGGAGATCAACGGTAACGGCCTGGTCAAACTTAACCACGCGGAAAACGA
GGCATTGCGCAACACGACTGCGGTGCTTTTCCAGCGGCTGTGGTACTTTAACCTGCCGGA
CATGACGCACGGCAACCTGGTGCTGTCGTGGAAGAACGGCCGGCTAGGGTCAGAGATGAG
TTCCGAGGGCTTCGATCTGAGTAACCGTAAGAGAGGTGCTGGCAACGCACCCAGGGGCGG
CTGGAAGGAGCGGGAGCGTGACCCCGTGCTGAAGAACACGCCCACGGGCCCTGCGGAGCC
CGGGTCTGCATCCTCCAAGGATCATATTGTGGAGGGTCCCGGCGTGTGGGTGCCTGTGGG
CGGCTCGGAGGATCTGATCCGGGGCTTTTTCCCACCCGAGCACCGCGCCAACATCACCCA
GGTGGTGATCAAAATGAAGAGCATGAAGGGCTCCAAGCCCTTTTCCATGATTTTCTTCGA
CACGGAGGAGCAGGCGGACGCTGCGCTGGCGGCGATCGACGCTGCCGCGGGCTCGGCGTC
CAGAATCAAAAAGGAACGAAAAGGACGGCCGAGACCGGGCAGGGGAGGAAGGGGCTAAGG
GGTTACGTTATCAGCGAGCCCCAGTCGTTCGTAGTGCGACTACAACCCACTAAGCTGGTT
GAGCTCAGCCGATTCGCGTGGATAAGGCTCGTTGAACATTGCGCGAGTCTGAGCTGACTG
GTTGGCCCCACGGTGAATGACGGCTGTCTTCGAGCCGTATCTCTCACGGACTCGGGGTTT
CCATGGCCCCTAGTAAACCGCCTTTGCCCAATGGCTGTATTAGTACATAGAGGTATAGTA
ATGGATGCTCGACACTTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22748g_CDS-001

Protein length: 521 aa.
Product: Conserved hypothetical protein

>YALI0D22748g_CDS-001 MSSKPHVSVLPVQGSRILCVADARGNLSMLNELAKEHNATCVIHIGTFGFLDNETVESAP
AGLLRHLAFFSPKLDPTSLPSEEDADIRKFLKSQSPDTSTCLLSELPEFISGAKRLAVPV
YTIWGSSEDVRVVEKFASSELHVPNLHIVGLASDTPCPLITCPGGLKIRLLGLGGAFIVP
KLLDHGASMTSSIGGMVGATWSTLLGVGELLCNVRDTYAVDEIRVFLCHNSPLKEELLCH
LAHTLRADYVICGGLHFFYGLSFNHFAVTPSFETYVSALGQRSAAFAAVWQRLRHSNDLT
SLTPQKLELLDLAANIFLTVPRLKDEEINGNGLVKLNHAENEALRNTTAVLFQRLWYFNL
PDMTHGNLVLSWKNGRLGSEMSSEGFDLSNRKRGAGNAPRGGWKERERDPVLKNTPTGPA
EPGSASSKDHIVEGPGVWVPVGGSEDLIRGFFPPEHRANITQVVIKMKSMKGSKPFSMIF
FDTEEQADAALAAIDAAAGSASRIKKERKGRPRPGRGGRG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG