YALI0D22462g

Overview

Description weakly similar to uniprot|Q6CEI0 Yarrowia lipolytica YALI0B15466g
Locus type CDS
Locus tag YALI0D22462g

Location

Species Yarrowia lipolytica Positions 2869912..2871679
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1768 (nuc.)
Previous locus YALI0D22440g Next locus YALI0D22484g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22462g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22462gYALI0D22462g_mRNA-001YALI0D22462g_CDS-001

Nucleotide sequence

 

>YALI0D22462g
ATGTTGCCCGAGCTGATTGAACGAATCTGCAGTTATCTCGAGCTGGCAGACATTGTTGCG
CTGCGAAAGACCAACCGCCACTACCGCCAGTCCATCTCCGAGTCGCTGGTGCGGGACAAG
CTGATGCAGCAGTGCCCCTACTACCGCCTTGAATACAGCCAGCACGGGAGCTGGAGGACC
GGCGGCGCCCATTACGTGCGCGACAGACACATTGACGTGTTCATTGACCTTGTGGAATGC
TCCTTCCACACTGACTCGCCTCTGCCGCGCGACTTTGAGTGCCTGTGTACCGACGTGGAA
CGCACATTTTCGTGGGACTACAACAACCGGGGCATTTGCTTCAACGAGAAGCAGCTGGAC
CTCAGCGATCTGAACACGGACTTTGCTGTGCCTTGCAACTACGGGGTGAGCTTTGGAGAT
GCAGGAACAACCATCAAATACCACGGGTTTGGGGTGACGGTCGAGGGACGGATGATTCAG
GCCAGACACACGTCCCGGGCCATTGCAGCAATATCTGTGCATCAGGGCCATTTGATGTTG
ACGGTCAAGTACCCCAACAAGGCTCCTGAGTCGATCAAAATGAACTGCAAGCCTCCCTTG
CGGCTGCAGGTGATCGGAGACTGTGTCTATGTATTTGGAAGACACGATCATACCTCAGTC
CTGTACTTGATCACTCCTACACGGTGTTCAGAGATGCTACACGCTCAACGGCGACAGCCT
CCTGCCGGCATGGTTCTTTACGATGGAAATGTCTACAATGTCGATATGGACGGACGATAC
CGGTGTTCGGTCACCAGAGTCACTCACAGGATCACGTCCGACAGAAACAGACCCCCAGAC
AAGTTCCACAGAGTGTACCAGGACGAGAAGCATTCGCAGTACTGTTTGATATACAAGTCC
ACGGGTCTAGTTACTGGCATTGTCGATTTGAAGAAGCGACAGAAGAGCATCCTGTCGCAG
ATCTCCAGCGACATTTTCGCCGACTACAACGGAGCTAACGAGCCCGAAGATCATTTGTTG
ATGGTTGGTCTGAGCCATGGAACTGTGGGGTGTTGGAGGTACACCATGAAATATCTGGCT
GAAAAGTACAAGAGCCAGCATGGAGCCGAGCTGCCTGTTGAGCTGCGGGCGGTGTTGAAA
CAGCGGGCGGTGAGCTTGAGTGAGGACGATGCGCGTGGACGGCGACCGGTGACCAGGGAG
TGGACCACGGGGGATCTTTTTGGCAAGAGTTGGATGAGTATGTCATCAAAGCGGGAGAGT
TTCTGACGTGGAACAGAAGGGATCTGATGGGACTCCTAACAGACGTTGAAACACGCACAA
CAATCGCAACTGTGTGACTCCCCTCTAGCCGATGACGCCGACATCACCAGAGCCAGACGA
ACAGACGTACATCCAGTGCACGTGTACATGGTCGTATGGAAGATGGGCTAGTCACTGAGG
TAGAATGAATTCTACAACCAGTCTCAGATTCTTGTTCTACATCTGTTGAAAAGCCCTGTT
CTCACTCTAGACAACTTGGTAGCTAGGTAACACCTAGACATTGACACTACCGGTCGAGAT
ACAAATGTCCGCCGTTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCTGGAAACGAA
ATTGTTTATTTGCGGTTTCTTTCCTGCTCCTGGTCGACCTCAATCTCCGGGGTCCCACCG
ATAACCGCCGTATAAGTTTCGGGTGAATTATTTGTATTTTTTGTATTTTTTTAAAAAAAA
GTTGCATATTTACCCCACACTTGGGGCC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22462g_CDS-001

Protein length: 422 aa.
Product: Hypothetical protein of a 30-member gene family, conserved in the Yarrowia clade

>YALI0D22462g_CDS-001 MLPELIERICSYLELADIVALRKTNRHYRQSISESLVRDKLMQQCPYYRLEYSQHGSWRT
GGAHYVRDRHIDVFIDLVECSFHTDSPLPRDFECLCTDVERTFSWDYNNRGICFNEKQLD
LSDLNTDFAVPCNYGVSFGDAGTTIKYHGFGVTVEGRMIQARHTSRAIAAISVHQGHLML
TVKYPNKAPESIKMNCKPPLRLQVIGDCVYVFGRHDHTSVLYLITPTRCSEMLHAQRRQP
PAGMVLYDGNVYNVDMDGRYRCSVTRVTHRITSDRNRPPDKFHRVYQDEKHSQYCLIYKS
TGLVTGIVDLKKRQKSILSQISSDIFADYNGANEPEDHLLMVGLSHGTVGCWRYTMKYLA
EKYKSQHGAELPVELRAVLKQRAVSLSEDDARGRRPVTREWTTGDLFGKSWMSMSSKRES
F*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG