YALI0D22000g

Overview

Description weakly similar to uniprot|Q07824 Saccharomyces cerevisiae YLL028w TPO1 polyamine transport protein
Locus type CDS
Locus tag YALI0D22000g

Location

Species Yarrowia lipolytica Positions 2795029..2797089
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2061 (nuc.)
Previous locus YALI0D21978g Next locus YALI0D22022g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22000g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22000gYALI0D22000g_mRNA-001YALI0D22000g_CDS-001

Nucleotide sequence

 

>YALI0D22000g
ATGTCTTCCGTCTCTTCCGAATGCCAGGGCCTGTCCTCCATTTCCGAAGCCTCTTTTTCC
GAGGCCTCTTCCTCCAAGCCCGTCTATGTCTCCACCGCTTGCGGTTCTGACGATCCCATT
ACTGCCGACGACCTCTTTGGCGAGCCCCAGTCTGTCCCGATCTCTCCAAGTGAGTTGTTT
ACGAGCAGCTCTTCTAACCAAAGTCCTAACAACGACTTTGAAGAAGAGGCACCCAAAAGC
TCCACCTCTCGATATGCTCTCCCAGACGAGTCTCCTAATGGCTATCAGACCCAGTCGACC
TTCAACTCGTTTGTGAACCTGTTTCGCCTCAAGAAGGATCCGCCGACAACTCTGCCACTG
GCGTCTCTGACAAGTACGAGGGGTCATAGGATGGACACTCCAAGTCCAACGCCTCCAGAG
GTAGCCAGACTGAGAGCCGTGCCCCACTCATCGACTTACTCGTCTGAGTCGTCGCTCAAC
TCATCAACAACCCGGATCTCATCCTCCAGGTCCTCCGATGACGCCTCCACAGTCGATGGA
AAGACCACACGCGCTACCCAGACGGACCAGATCTACGCGGGAGACTCGGGAATCATTCTC
TCGACTTCCATAACATCTTCCCAGAGCTCTCAAGAACACTTTCGAGAACGATGTCGACGG
TCTAACTGTGTCACATATATTGTCCAGTGGGACACAGAGAACGACCCCAGGTACCCATTC
AACTGGCCCAACTACAAAAAGTACCTGGTTGTTGCTTCCCAGGCCCTATCTGCTATTGGC
CCGCAAATGTGCAGCTCCATGTACGGACCAGCCGTTGCAAAGATCGAAGAGATGTTTGGA
GTCGGTAAAGATGTCGCCATGCTCAGTACCACCGTCTACATGATGGGTATTGCTGTTGGG
CCCATGTTCTGCGCGCCCATGACCGAGTCATTTGGCCGGAAGATTGGCGTCTTCTGGCCC
TTCTTCGTCTCGCTCATCTTCACCTTTCTGACCGTCTCCGTCACCTCCTTCCCCACCTTT
ATGGTACTGCGATTCCTCTCTGGAGCTCTGTCTTCGCCTCCCATCCTGTCGTCCGGAGGA
GCTCTCAAGGATATGTTCAAGCCCGAGCGACGGCCGTACGTGTTGCTTCTGTACGCCATT
ATTGTCGCTGGCGGCCCAGCCATGGGTCCCATTCTCGGCTCTCAGGTCATCAAGTGGACC
GGCGACTTCAGACACTTGTCGCTCGTGGCCGGTATCTACCAACTCATCATTTGCACCTCC
AACCTCATCTTCATGCCCGAGACTTACGCCCCTGTGATTCTGCAAAAGATTGTGCGGAAC
TTCAGTCTGGATGCCGGCGGACTGAGAAACCTGGTGACAGAACGAGACCTCGGAGGCCAT
GCCCGTGGTTTCTCAGTCAAGAACCTGTTGAGACCCTACCAAATCATGCTCACCCCGGTC
ATGCTGCCGCTGCAGATGTACGCCGCCATGATGTTCGGACTCATGTACATGGCCATCTCG
CTGGTGCCCAACGCAGTCGTCAAGGAACACAACTGGACCCGAGACCGAGCGGCCTGGATC
AACCTCAACTTCATTGCCGGCCTCATATGCGCCTCTGGAGGTATCGTCTGGTCAATCTGG
TACTTCAACCGGATGCTCAAGAAGCACGGAGGAAGCAATAAGGAGCCCGAAAAGCGGCTC
CTGATCATGCTGCCGGGGTCCCTGTTCCCTCCTATTGGATGCTTTCTGTGTTACGTCTTC
TTTGACAAGACCTGGGCAATTTCGGTCGTGCTGCTTCTGTTCCTCGGTATCGGATTCTTC
ACCATTTTCCAGTCCACCCTCAACTACGTTGTTGACATCCACTCGGAGTACTCGGCCTCA
GCTGTGTCTGCTCTGACGTTTCTGCGGTCCATTTTCGCCGGCGTCTTGCCATTTATCGGC
ATGGCGGCCATCGAACGGGTCTCTTTTGCCAAGCTGTGTTTCATTCTGGGCTTCATCACG
ACCGCAATGTGCGCTGTGCCGTGGTTCATTTTCAAATGGGGGCCTGGCCTGCGAGCGAGA
TCTGCTTTTGTTGACGTCTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22000g_CDS-001

Protein length: 687 aa.
Product: Conserved hypothetical protein

>YALI0D22000g_CDS-001 MSSVSSECQGLSSISEASFSEASSSKPVYVSTACGSDDPITADDLFGEPQSVPISPSELF
TSSSSNQSPNNDFEEEAPKSSTSRYALPDESPNGYQTQSTFNSFVNLFRLKKDPPTTLPL
ASLTSTRGHRMDTPSPTPPEVARLRAVPHSSTYSSESSLNSSTTRISSSRSSDDASTVDG
KTTRATQTDQIYAGDSGIILSTSITSSQSSQEHFRERCRRSNCVTYIVQWDTENDPRYPF
NWPNYKKYLVVASQALSAIGPQMCSSMYGPAVAKIEEMFGVGKDVAMLSTTVYMMGIAVG
PMFCAPMTESFGRKIGVFWPFFVSLIFTFLTVSVTSFPTFMVLRFLSGALSSPPILSSGG
ALKDMFKPERRPYVLLLYAIIVAGGPAMGPILGSQVIKWTGDFRHLSLVAGIYQLIICTS
NLIFMPETYAPVILQKIVRNFSLDAGGLRNLVTERDLGGHARGFSVKNLLRPYQIMLTPV
MLPLQMYAAMMFGLMYMAISLVPNAVVKEHNWTRDRAAWINLNFIAGLICASGGIVWSIW
YFNRMLKKHGGSNKEPEKRLLIMLPGSLFPPIGCFLCYVFFDKTWAISVVLLLFLGIGFF
TIFQSTLNYVVDIHSEYSASAVSALTFLRSIFAGVLPFIGMAAIERVSFAKLCFILGFIT
TAMCAVPWFIFKWGPGLRARSAFVDV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG