| Description | Ylt1, ENA|AJ310725 Yarrowia lipolytica LTR retrotransposon Ylt1 |
|---|---|
| Locus type | mobile_element |
| Gene name | Ylt1 |
| Locus tag | YALI0D21274t |
| Pseudogene | This locus may contain pseudogene(s) |
| Species | Yarrowia lipolytica | Positions | 2686388..2695839 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Antisense |
| Chromosome | YALI0D | Total length | 9452 (nuc.) |
| Previous locus | YALI0D21230g | Next locus | YALI0D21318g |
Here is a representation of the structure of the locus YALI0D21274t oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0D21274t
TGTAACACTCGCTCTGGAGAGTTAGTCATCCGACAGGGTAACTCTAATCTCCCAACACCT
TATTAACTCTGCGTAACTGTAACTCTTCTTGCGACGTCGATCTTACTCAATTTTCCTGCT
CATCATCTGCTGGATTGTTGTCTATCGTCTGGCTCTAATACATTTATTGTTTATTGCCCA
AACAACTTTCATTGCACGTAAGTGAATTGTTTTATAACAGCGTTCGCCAATTGCTGCGCC
ATCGTCGTCCGGCTGTCCTACCGTTAGGGGTAGTGTGTCTCACACTACCGAGGTTACTAG
AGTTGGGAAAGCGATACTGCCTCGGACACACCACCTGGGTCTTACGACTGCAGAGAGAAT
CGGCGTTACCTCTCTCACAAAGCCCTTCAGTACCGCCGCCTGTCGGGAACCGCGTTCAGG
TGGAACAGGACCACCTCCCTTGCACTTCTTGGTATATCAGTATAGGCTGATGTATTCATA
GTGGGGTTTTTCATAATAAATTTACTAACGGCAGGCAACATTCACTCGGCTTAAACGCAA
AACGGACCGTCTTGATATCTTCTGACGCATTGACCACCGAGAAATAGTGTTAGTTACCGG
GTGAGTTATTGTTCTTCTACACAGGCGACGCCCATCGTCTAGAGTTGATGTACTAACTCA
GATTTCACTACCTACCCTATCCCTGGTACGCACAAAGCACTTTATTTTCTCACATCTGGT
GGACGACACCTCGTTTTTGTTTCGAGTGATAGCCTGCCAGATTTATTGTGCCTTTACTGT
CGTACCAGCGTATTTTACTTCCCTTTCCGTTCTTTCGTTTTCACCATGTCGAAAGTAACA
AAAGACGAGTTCCAGGCTCTCACCGCGAAGATGGACGCCTTGACGCTCTCCCACCAGGAG
ATCACCACTACTCTCGCTACCGCGGTTAATACCAAGGAATTCCGCTCAGCCTTAGACGAG
CTCAAGCAGTCAAATGAGTCTTTCAAGACACATCAGGCTGGGGAGTTTGAAAAGTTGCAC
CAGTTGGTGTCGGCCCAGCACGAAACCATCGCGAACCTCAGCAAGCGTGTCGACTCACCC
CCGAGCACCAGCTCCCTTGAAGGCATTTCCCGTATTGGCAAGGCTGATTCCGAATTTGAA
CCCGACACCCCCCAGAAGGGTAACTCTGTCCTACATGGCATGGACTTTGCTGCCAGTGAC
ACGGGTTCTGTTGACTATCGAAAAGAATCCGACGCCCTCAAGTCCATCATCCGGAACGAG
GTTTACCCCTCCTTGTCCAGCGAAGAATTCCGAAAACAGTTGTACGCTTACAAATCTTTT
GATTCCCGGGTGGCTACCTTTATCCTACTCCAGGATGACATCCGTTGGAGCACCAGAGCT
CGGGCTTTCCACCTTTGGTGCGGTGTCAACGATAAGCAGCCCCTCTTCGATCAACAGTAC
CTCCAACTCCGAAGCACCTTTGAAGCAGAGACTGCTGATGAATCAACCAAGCCAGGTGCC
CACGCTCGTCTGAACACCGCTTGCGAACGTCTCCTCCGGGACCTTTTTCGAAAGCGCGGG
TTTGACCACGAACCTGCTGTCTCCTTTGCTGAACAAGAGGAGGAACTCCGTTTCCGGTTC
AAAGATTACCACACCGCTTTCTCTATCGAGACACTACGTGCGTACCTCTCTGCTCTGAGC
ACCGCTCTGACCTCCTCACCTCTGCCGGTTCTCTCTCGGTGTCTCCAGTTGCAGAAGCTC
GCTCCGACTCACCTGGGCACCGCCCTCGGACGCGAGATCCCTCGTGACAACACTCGTTGG
CTGAGCCTTGGCATGGACTCCGACCCTGAGCGTGACCATCAAGTTGCCACGGAGCTCATC
CAGCCCCTCGCCAAGATGATCACCCAACATGTCCAACGACTTGACGATCTCAATGATGAG
GCTCTTCTGAGATGGCGACAGCACACGGTATCTTTCGAAGACGTGTGGATGTGGGTCGAG
CCTTCCGCCCCACCTGAGCCTTCCACGCCTGAACCTGACAAAGTCGTCGTTCACGTTGCG
GGACGTGGTCGTTCCACCAGGAAGCCTGCCGACGGCCCTGTCTCAACTGAGACTGTGCAG
AAACCCACAATCCGTGCCTCGGATGCCTCAACCTCCTGGGCAGCTGACAAGGCTCCTTGT
GTTTTCTGTGGTTCCACTGCCCATGCACTGGTCAACTGCGATGACTCCGAAGGCAGCCCC
TTGGTCAAGGCCAAGTACCTTGGCAGCTTCAAGTCTTTCACCCGACTTGGCTACCAGGGT
TTTGAAAAGTATCTATCGCCTGTTGATGCTGACTTCCCTCTAAAACAGAGCGCTCTCTAC
ACTTCCTGGAAGCAGAAGGAATGGTCGAATCCGCTTATGGAGCCTAGACTTCGAACTTTC
AATGCGCAGTGGCGTCCTGCCCTAGCTGGCCGCGTAAATGCCGTTGAATTTGTACACGTT
GAAGACCCAGGCGGGCCTTTGGATAACAGCTATGACTCTGACTCATCTGCGTCTGGTTAT
GACTTCCAGGACCTTCTCCAACCCGGCACGTTCAGTGTCTGTCTAGGAGGGGTGCCTCGA
GATCTTCTGTCTGATACGTTTTCCTCCTACGACGAGCCTCGCACTATCATTGACTCCACT
GACTCCCAGCTTGAGCTCACGAAAGAGGCAATCCACCAGCACATTCTCCAGATGGCAAAA
CAGCCCACACCCCTCCCCGTCACTTACGCAATTGATGCGCCTGTGTCAGGCTCCTACAGT
GGCAACATGAAGCGCCTTGTGGCACACCCAGCCTTCATGCAGCTCGTAGCTCGCTTAACT
GCTCCCCCGGGCACGTTCAAAGCCTCCACGCTTGAAGCGGGTTTTGTAGGTGCTGTTATG
GCCCCGTCTTCCCCAGTTGCCGGCCGTGTCTACTTTGTTGATGCGGTCCAGCGATTGCTC
AACAAGTACAACGTAGTATTGCCTACGAAGCTTTACGAGTGTTTCGCTACAGTCCGAAAT
GACCTCATGGAGCCCGCTTACGCCACCGAAGGCGATCCTCGCCGACAGTCTCTCAAGACC
AACATCAACGCCTTGAAAACTGTTGTCGACAGCAAGCACCCTGACAGACCAGTGGCTCCG
TTGCCGCGACGCAGCCCCCGTCGTGATGTCCGTGAAGACATGCCCCCGCCTGCTTTGCCT
CAAGCGACAAAACGTGGTGCCGCTTCTTCTACGGTATCTTCCGCTGCTCCCCCCACTGCT
AAGCGAACCAAGGCTGTAGCCAATCCCTCCTCAGTGGGGCCGACTGACTCCGCATCCTCC
ACGGGCGCTGTTGTTGACGTCCCCAGCTCTCGTGTGGCTGTTCACCCCCCCCGTCTGGGT
GATAACCACTACGTGAGCCCTGGAACCCGTGTCACCAACCACATCCACGATGCCTCTGCC
GTTGCGGAGAATGCACCCTTAAAAGATTACAAGGATGCTCTGGACCGCCTCCCGTCTGAC
CTAGAGGACTCCAAGGCTCTCTTCACCAGAGATCATCCTCGTTACGACAATGCCTTGCTG
AAGGCTGGGCGTCTCCCTCTCTTCAAGCTTGAGGCCATTCATGCTCTGCCGGAATCGGAA
AAAGCAGACTTGTTTGAGCGCATCCTCAAGGCGTCGGATGTTGATGGCCTCGTTCTTTTT
GAGCTTCTCCAGGTGTGCCCTGACCTCACAAAGTACATTTGGAAGAACTTCCGTCACCAG
CGGCACCGGCTTGCGGGTCCTGACATCCAAGCCATCGCTCTTGAGCTCGGGGACGATCTC
ATGGAGTGTGCCATGGATCTTGCGCTCAACGTGATTTCGTCCACACCGTATGAGCTCAAC
TCTGGCACCTTCGGTCGTCTTCAGGAGGTTTTCACCACCATTGACCGTCAGCTGTACGAC
GACAAAGTTGGTAGGCCACTCTCGCCCCACTTCACCGACAACATTGCTCTTTTCGACCAA
CAGACCAGCGCCCTTTTTGACAGTGGCTCGTCTAACAACGTCATCGACACTGATTTCTTT
GCCCTTGTACTCGCGAAGGCTGGTGTCACCCCTGACCGGGTGATTGTTTTTTCTGACGGA
CAGTCCCACGCCACAGTCGCAAACGGAGCCAAGGTAAAAGTTGATTTCTGGGCGCTTCTC
CCTGTCACTTTCCTGGGTGTCGTTACTCTTGAAACATTTTGTGTCATGAAGTGCAGCATG
AAGTGTATTCTCGGCACCGGATACATCAGCAAACTGCGCATTTCGTTCGACCATGATCGT
TACCGTGTCGCTTCAGTGGAGAACCCTGGTAACCCTGGCGTCCGGTGCTACCCTAGTGAC
AGACCTTCAGCTGGCCTTGTTGCTCACCTTGGGTTGCTTGACCGTCTTGTGAGGCCCGGC
CGCCGGCCTGTGCCTGCGTTTCCTGCTGCCAAGCTGTCTCGCCAAAACGTCATGGCACAC
GTTCGACCCACTCCCTCACTCTGTGGTGATGTTGATGAAGCAACAAATCTCCTTGACGCC
TCATCTCTCGGAGGGCCTCAGCCTGGATCTTACTCCCACCGTTCTGAAACAGCGGCAGGC
TGTTTTGCCATATCCTTTGCTGATGACTGTGAGTCTGCCGGCCCGCCTTCGAGCGCTGCC
ACCGCCATTCTCAAGGCTCTAGCGTCCAGCTCCGGCCCTGATCCCCTTGGCATTCCCCCT
CGTGATGACCCTGACGAGTCTTACTCCTCATCACCTGGGCACCACGGTGATGTCTCTGGC
GAGCCCAACTCCTCATCACCTGGGCACACCTCCGCTCCCGTCGACGGTACGCTTGGACCT
TTACTGCCTACCGATGCCTCATCTGTGGATGACTCCAACGAGCTCTGCTCCTCCTCTTCA
GGCTCGGAAGCCCCGTCGGAAGCCCCGTCCGGAGTCTCGGCCGCCTTGTCAGATGTAGGC
ACCGTTTTCCAGGAGAGCTACACGTCGTACCGTTTCCATGACAACCTTGCAGACAATGCT
CTTCATGCCAGACCCCCCGACGCTCATGCTCTCAGTGGTTTTATTTCTTCTGCCGACCTC
GACAGTGTTTTCCAGTATCCACCTCCTGCATCGCCCTGCAGCTGCTGCCAGCAGCCTGTA
CGTGAGTGTCGTGTACTTGGTAACACTGTTTTCATCATGGCTGACATTGGCGACTCGGCT
ACCATCGTTCAGGTTCAACCGGATACTGACCTGTCCATGCGCCAACAGCTCTACCTTGCT
GAAGTTCTCAGTGATGCCCAAGAAATCACCCCTGAAGACTCTCTGCATTCTTTATCTGTC
TCCGTCAATGCCATGTACAAGCCGCTACACAAGCGTTCTCTGCCTCTAAATAAGCTTCGC
CCGGACGGTTCCTTTCCTGTCGGTGACGGCTCCAAGCCTTCTCCGCGACATCGCAACTTC
TCTGGCGACGAGTCTTGCCAATTTGATGCCAAACTTGCTCCAGTCCTTTTCCCGGCCGAG
CTTGCTCTCTGTCGCCATCGCATGTCGGACACGGAGGGTGTCTGGGCTTTCAACGAAGAC
CAGGAGGGTGTCCTCAGTCACCATATTGAGGAGCCCACCAAGATCTACGTGGAAGAGGGA
GGCGTTATCAACTCAAAGCACTTCCCTCTCCGCGGGGCTATGGTCGGCGCTGCCAAAGAC
ATCATCATGAAGGGTCTCGCCAACGGCCAGATGGAGCCCAGCTCCTCCCCCCACCGCAAC
GCCTGGTTCCTCGTGAGCAAAAAGAGCTCGGGATACCGTTTCATCCTTGACTGCCAGGGC
CTCAACAAGATCACCTTGAGAGATGCTTTCCACCCACCCAACGCGGACCTCCTGGCTGAG
AGTTTCTGTGGTCGTGCTGTAACTTCCCTGCTTGACATTAAGAATGGTTACGGTCAGAAG
GAGATTGCTCCCGAGTCCCGTGACTTGACGGCTTTTAACACAGATTTTGGCTCCTATCGG
TTAACGCGCCTGCCTCAAGGTTGGTGCAACTCTCCAGCGGTGTTCCACCGTGCCATGCTG
CGCGTACTTGGGCCCCTCTTTCCGGATCAGGCTGTTGTTTTCTTGGACGATATTGGCGTT
CTCGGGCCTAAGACTGACTATGGCGGAGCCATGCATGACGACTTTCCGGGCTGCCGCCGG
TACATCGTCGAACACATGGACAACCTCATGGCTGTGCTTCAGAATCTCTATGAAGCGGGT
CTGACTGTGTCTTTCGACAAGGCCGAGCTTTTCGTCAGTGAGGCTGAGTTCCTCGGTTTC
CTCACTACCTCTGAAGGCCGCTTCCCGTCCCCTGGCAGTTCCGAGAAGATCGAATCTTTC
GAGTTCCCCACTACTGTCCGTGGTGTGCGCTCTTTTCTCGGTGCTGTGGTGTATTTTCGC
ATGTGGATCCCTCATTTCAGCAGTATCGCTGCACCTCTGTACGACTGCATCTCCGCTGCG
CAGAAGGCTGGCAAACTCAAGATCACCAAGACCGAGGCCACCGAGTCTGCTTTTATGGCG
CTAAAAAAGGCTATGGTGAGCCCTGCGGTTCTGCACCGCTACGACCCCACCTTACCTATT
GTCATCACCACTGATGCGTCCTCCCTCGGATGGGGCGCAGTAATGTCTCACATCGTCAGT
GTTGGCCCTCCGGCTGCCCGTCGCCCCGTCCGTTTCGAGAGTGGTTTGTGGAACCCCACT
GAGCGTACCTACGCATCCACCAAGACTGAGTGCCTTGCTGTAAAACGTGCCTTGGAGAAG
TGCCGTCACTATGTCACTGGCGTTCATTTCGTGATCGAAACTGACAACCAGGCCCTGGTT
TTCCTACTGCAGCAATCCCGAGTTGAACTCCCTAACGCTATGTTCACCCGGTGGTTTGCT
TACATCAAACAGTTTGATTACGAGGTTCGATTTGTTAAAGGCCGAGACAATCCAGTGGCC
GATTGGCTGAGTCGTGAGAAATTTTCTGACTTCCGACCTGTCGATTTTCGCCCTCCTGTT
GCTGATACAGCTCGACAAGCTGATGAGCTTGCTCCGCTTGTGCCCCCGACTTGGTCCCCT
GTGGCCTCCATCACTGTCCTGTCCATTGGTCCAGAGCCCGTTTTCATCCACAAAGGCATC
TCTCTCGATCTCATTTTCACCACCATTGCCTCCGGCGATCTTGATCGAGATGGTGTTGAC
ATTCCGCCTAGACTGCGTCAAATCTGCTCTGAGTTCTTCATTTTTGACGACATTCTCCTA
CTGATCAGCTCACCTGGTCTCCATCGACGTGTTCTCTTCACAGAGAAGGAGGTGTCTGAG
GTTCTCCGAGCTACCCATGAACAATATGGCCACCGCGGTGCTGCTGCCATCCTTCATGCT
CTCCGTCGCCTCTATTACTGGCCGGGCATGGCTGATCACGTGAAGTCCCATCGTGCATCA
TGCGGCACGTGTGCAAAAGCCACCAACCATGGTCTTCTCAAGGCGAGTCTCCACTTCGTG
GTTCCCCGTCTCATTTGGGAGACAGTCCAGCTGGACATCCTCTACCTTCCCGCTGTTCAT
GGTCCCACCAAGGAGTACCCCGATCTGGCTGATCCCGCCAAGGCTCTCGCTGCTCAAACC
ACCCTCACCGACTTCCTCCCCACTGCCCCTCAGTTCACTGATGTTTCCTCTGCCCCCCGC
GGACGGCTAAATGTCACTATTGCCCCTACCAGTATGTCCTTGTCGCTCGTGATGAATTCT
CTGGCTGGCCTGAGGCGGTGCCCTTACGAAGTATCAACTCTCTCTCCACAGCCGCTTTCT
TCTACGATTTCATCATTGCTCGTTTTGGCGTTCCCCGTCGGGTCTACACTGACGGTGGTA
GTGAGTTCAAGGGTGATTTTAAGCATCTCTGCGAAGATTTCCACATCAAGCAGGTTTTCA
CCACTCCTGCTCATGGTCAATCGACTGGCATTGTGGAACGCGGTCACCAAAACCTCCTCC
ACTGCCTGCGCAAATACGGTCGTCAGTGGATCTTATACCTCCACACCGCCCTCTGGGCTG
ACCGGTGCACCCGTCGTTCATCCACGGGTAAGTCACCTTTTGAGCTGATGTATGGTGTCT
CTGGTGTCTTGCCTGTCGAAAGTCGTTTCCTGACCTGGAATTACCTCAGTGGCAAGACCG
ACCTGGCCCACAACGACCCCGCTCATGCTGCTTTTCTGCGCACCTTGCAACTTGCTGCTT
CTACTTTCGAAGTTGGCTCTGCTCGTGACCACCTGACCCTGCAACGCCAGCGTCAAAAGG
CGTTCTACGACAAACATCACAACACAGCTGATACAGATCCCTTGGCCGTAAATGATTTCG
TTTTTGTTCACGACCTCCGTCCCCACAACAAGCTGACTCCTCGTTGGACTGGTCCCTCCA
TCGTGACCGCGTGTCACCCTGAGACCAGCACGTACACTGTCAACGATGTTGACGGTGAGA
ACCCGCGGCGTATCCACCGCAACCGCCTCAAGGTTTTCCACCCCGCTTCCATCGTTGAGT
TCCAGGACCGCATGAAGGAACATCAGTCCCGCGAGTCTGCTCTCCCTGCCATTCCTGGCC
GCTTTTCTGCCTGTTCTCCACATGTTCTTCCCCCGGCTTCAGTGGCTACTCGTTCCGTCC
GTTCTGCAGCTACCACTGCGTCGACTAGAGTTACTTCTCGGTCGAAGCTCGCTCGTGTTG
ATTCTGGGCTTGCTCAGGGCTCCTTCCTTGCTCAGGGCCTTTATTCTTGATTCTTCTAAC
CAGGGCTTCGGGACGAAACCCCGTTAGACCTGGGCAGGTGTAACACTCGCTCTGGAGAGT
TAGTCATCCGACAGGGTAACTCTAATCTCCCAACACCTTATTAACTCTGCGTAACTGTAA
CTCTTCTTGCCACGTCGATCTTACTCAATTTTCCTGCTCATCATCTGCTGGATTGTTGTC
TATCGTCTGGCTCTAATACATTTATTGTTTATTGCCCAAACAACTTTCATTGCACGTAAG
TGAATTGTTTTATAACAGCGTTCGCCAATTGCTGCGCCATCGTCGTCCGGCTGTCCTACC
GTTAGGGGTAGTGTGTCTCACACTACCGAGGTTACTAGAGTTGGGAAAGCGATACTGCCT
CGGACACACCACCTGGGTCTTACGACTGCAGAGAGAATCGGCGTTACCTCTCTCACAAAG
CCCTTCAGTACCGCCGCCTGTCGGGAACCGCGTTCAGGTGGAACAGGACCACCTCCCTTG
CACTTCTTGGTATATCAGTATAGGCTGATGTATTCATAGTGGGGTTTTTCATAATAAATT
TACTAACGGCAGGCAACATTCACTCGGCTTAAACGCAAAACGGACCGTCTTGATATCTTC
TGACGCATTGACCACCGAGAAATAGTGTTAGTTACCGGGTGAGTTATTGTTCTTCTACAC
AGGCGACGCCCATCGTCTAGAGTTGATGTACTAACTCAGATTTCACTACCTACCCTATCC
CTGGTACGCACAAAGCACTTTATTTTCTCACA
Locus sequence
Up/downstream sequence
Protein length: 2621 aa.
Gene: Ylt1
Browse the locus neighborhood with JBrowse:
ATG