YALI0D08140g

Overview

Description similar to uniprot|P36110 Saccharomyces cerevisiae YKR013W (ohnolog of YJL079C) PRY2 protein precursor (Pathogen related in Sc 2)
Locus type CDS
Locus tag YALI0D08140g

Location

Species Yarrowia lipolytica Positions 1035206..1036452
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1247 (nuc.)
Previous locus YALI0D08118g Next locus YALI0D08162g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08140g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08140gYALI0D08140g_mRNA-001YALI0D08140g_CDS-001

Nucleotide sequence

 

>YALI0D08140g
ATGAAGTTCTCCACCGCCCTCCTTACCTCTCTGGCCGCCTTTGCCGCTGCCGCCCCCATC
GACTGCGACGACAACAAGCTCGTTGCCCGTGACGTTGTCACCGTCTTTGCCCACGAGACC
ACCTACGTGTACGCTAACCAGGACGCCGCCCCCGCTCCTGCCGCCACTCCTTCTCCTGAG
GTCAAGGCCCAGGCCGCCGACAACAACGCCGGAAACGTTGTCTACCAGTACGTTTACGTT
ACTGTTGACCAGAACGGAAACCTGATCCAGAACACCGCCGTCGAGACCAAGCCTGCCGCT
GCCGCCCCCACCCAGGAGGCCCCCAAGCAGGAGGCACCCAAGCAGGAGGCCCCCAAGCAG
GAAGCCCCCAAGCAGGAGGCCCCCAAGCAGGAGGCCCCCAAGTCTTCTGAGGCCCCCTCT
TTCAAGGCCGAGGCCGGTGAGTCCGCCAAGGTCCAGACCCCCGCTCCTAAGCCCTCCCCC
GCTGCCCCCAAGCCCTCTCCTTCCCCCCAGGCTGAGGCTCCCGCTTCCAAGTCCTCCAAC
CTTGACTCTTGGTCCCAGTCCATCCTCGACACCCAGAACGCTAAGCGAGCTGAGCACGGT
GTCGGTGCCTTCGCCTGGAACGAGACTCTCGCCAACTTTGCCTCTGATTACCTTGAGAAG
GCTCAGTGCAACTTTGCGCACTCTGGTGGCCCCTACGGTGAGAACCTCGCCATGGGCTAC
CCCTCCGCCCAGGCCGCCGTCAACGGCTGGTACGACGAGGTCAAGGACTACAACTTTGCC
CAGGGTGACTTCTCCATGGCCACTGGCCACTTCACCCAGATGGTGTGGAAGGGCTCTAAC
CAGCTTGGTTGCGCCAAGAAGGAGTGTGGCGGAAACGGTGCTTACGTTGTTTGCGAGTAC
TACCCTCGAGGCAACATCATCGGTGCCTTCCAGCAGAACGTTCTCAACTAAGTATCTTTA
CTTTAGTTGATTACACCACTCCTTGTTGATTATACTTACTGTTCGCATTATTATCTCTCA
GTCGCTGGCGACGTAGATTAATTATTTGATACTTCCACACCCCCCCCTTTTTGAACTTGT
GTCTGTTATTTGTCTGTATTGGTTTTTTTTGCCTTAGTTACAGGTTTTTTTTTTACCCAC
TGCTTTGATGGTGGGCGTTCATTCCATTCTCAACTCAATCGCGAGACGGGAAGAAGGCGC
GCCGATCATGGTGGGAATACAGATGAATATACTTTTTTTTGGATAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08140g_CDS-001

Protein length: 317 aa.
Product: Sterol binding protein involved in the export of acetylated sterols, putative

>YALI0D08140g_CDS-001 MKFSTALLTSLAAFAAAAPIDCDDNKLVARDVVTVFAHETTYVYANQDAAPAPAATPSPE
VKAQAADNNAGNVVYQYVYVTVDQNGNLIQNTAVETKPAAAAPTQEAPKQEAPKQEAPKQ
EAPKQEAPKQEAPKSSEAPSFKAEAGESAKVQTPAPKPSPAAPKPSPSPQAEAPASKSSN
LDSWSQSILDTQNAKRAEHGVGAFAWNETLANFASDYLEKAQCNFAHSGGPYGENLAMGY
PSAQAAVNGWYDEVKDYNFAQGDFSMATGHFTQMVWKGSNQLGCAKKECGGNGAYVVCEY
YPRGNIIGAFQQNVLN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG