YALI0D08118g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D08118g

Location

Species Yarrowia lipolytica Positions 1031431..1032777
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1347 (nuc.)
Previous locus YALI0D08074r Next locus YALI0D08140g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08118g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08118gYALI0D08118g_mRNA-001YALI0D08118g_CDS-001

Nucleotide sequence

 

>YALI0D08118g
ATGCCAATATTTGGGTATTACCGCTTTGGGTCACAAACATGCTTTAGACGACAGGTTCCA
AAGCCTATCACCACCATATCGTCGCACAGCAGACATCTACGCACGGCGTTTACACTGGAC
CAACACGACATGACAGACTCTCCAAAGACCCCTCGACGGTACAGTCATCGCCGGCAGTTG
TCAAAAATCAAGTCTGAGCCTCGACGGCGAAGTTCGGGGTTAGTTGTGCCATCCGGCACC
TCTCCAGATGCCCGAGTGCACAAGTACGGCGCTCTAGGTAGCCCAGGAGCCAACGGAAGC
CATCACAAAGCCCGTGTGATCAGCCAGAGCACGGGTCTCGCCAAGCTAATGCTCGTGGAA
ATGAACCGCGATCTCAACCGGCAGTTTGACAATCTGGCCAAGCTGCAGCGCATCGACAGC
ATGTCTGACCGAGACACCAGCGGGTCTGGCAGCTCAAATGGACGAGGAGGCTCGTCGACA
GCATCAGTTCGATCCGACGTGTCCAGTTTCACCTCGGACCCCAATGTCACTGAGGACGAC
ATTCTCAAAGCCATTGCTGCCAAGCAGAGGAAGGTACTCGATCTGAAGACCGAACTCGCA
CTGGCTGAACGAGAAATCTCCATCCTCAGTGACAAATACAGCGCCATGGTCACCAGACGC
ACAGTCGGCACCTCTGAGAGCGCAAGTGACCCCAACAAAAGTCCTCAGAGAGGTGGTACC
CCAAGAGCCGAGCCCGAAAACGGTCTCTTTGGTCAGCTGAAGAGATCGTCCACTTTCAGA
TCAGTCAGAGAGAGTATTGGTATGGGCAATGCCGATGACAATGATCTGCCCATTAAAGAG
TATAAGGGATCCCCCAGACGTGAGAGCAGACGTCAATCGATGCTGCCTAGTGCACTGTCG
CCATATTCAGAGGTCAAGGAAGCTACTGCTGAAATGACTTCGTCACCATCGCCAAGGCTC
TCCATAGCCAAGAAGAAGAGTCTAATGTTCCGGGCCCAGAGAGCGTTCCAGCAACAGCAG
CCTTCTCTCAAGCTCAAGCATTCGTCACAGCAGCTTAAGCAGTCAATTCAAAACGGAACT
GACGAGCTGCTCATCAAGGGGCACCGGTTGTTCAATGATATCGCCAAGGAATTCATGAGC
TCAGACGATGAGGGCGAGTACGACTGGAATGAGGACAGTGACATTGATGAGGCTGATTTC
GAGGGGCCTGTTGAGAGATTGTAAGAGGCATTACATGCCATGCTATTTACGCACAAGTGA
CTTTGTCAAGTCGTGAGCTGACTTTCACCTGTACCTCACTGAACATTAATATACATTAAC
AATGTACAATACATTATGACTTTATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08118g_CDS-001

Protein length: 408 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D08118g_CDS-001 MPIFGYYRFGSQTCFRRQVPKPITTISSHSRHLRTAFTLDQHDMTDSPKTPRRYSHRRQL
SKIKSEPRRRSSGLVVPSGTSPDARVHKYGALGSPGANGSHHKARVISQSTGLAKLMLVE
MNRDLNRQFDNLAKLQRIDSMSDRDTSGSGSSNGRGGSSTASVRSDVSSFTSDPNVTEDD
ILKAIAAKQRKVLDLKTELALAEREISILSDKYSAMVTRRTVGTSESASDPNKSPQRGGT
PRAEPENGLFGQLKRSSTFRSVRESIGMGNADDNDLPIKEYKGSPRRESRRQSMLPSALS
PYSEVKEATAEMTSSPSPRLSIAKKKSLMFRAQRAFQQQQPSLKLKHSSQQLKQSIQNGT
DELLIKGHRLFNDIAKEFMSSDDEGEYDWNEDSDIDEADFEGPVERL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG