YALI0D07876g

Overview

Description some similarities with uniprot|Q10355 Schizosaccharomyces pombe Hypothetical RNA-binding protein
Locus type CDS
Locus tag YALI0D07876g

Location

Species Yarrowia lipolytica Positions 1012062..1012699
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 638 (nuc.)
Previous locus YALI0D07854g Next locus YALI0D07890g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07876g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07876gYALI0D07876g_mRNA-001YALI0D07876g_CDS-001

Nucleotide sequence

 

>YALI0D07876g
ATGACCAAGGTGAAAGGCAAGCCAAAGAGAGTGCGAATCTCGCGAGTGGCTGGCACAGAC
GCCCCCTCAACGCCACAAATGTCCGACCAGGAGTATGCCGCAGCCCTGGCACAACAACAG
CAAGCATACATGCCCAAAAACCTGGCGTCCAAAGCAGGTCCGTCTTCCTCTCTTGCAAAC
TCTCCCGCCACCAACTCACTAGCAGAAACCCACACCGTCAAGCGAGAGGGCGGCGGCAAA
AAGTGGGAGGACCCGTCGCTTCTGGAGTGGGACCCTACACACTTCCGACTGTTTGTAGGC
AACCTGTCAGGCGAAGTGACGACCGAAAACGTGCACCGCGCATTTCAAAAGTACAAGTCG
CTGTCTAAGGCCAAGGTGGTCAAGGATAAGATTTCGGAAAAGTGCGCGGGCTACGGCTTT
GTGTCCTTCTCCGACCCTGACGACTACTTCAAGGCCTTCAAGGAAATGGACGGTAAGTAT
ATTGGCAACCATCCCGTACAGCTCAAACGAGCCAAGACAGAAATCAAGGCAGTGGCCAAA
AAAAAGACCAAGCCTTATGAACGAGCTCGTCCCTATTAGAGCTCCAGCTACTTTTAGCTA
TGCTATGTACCATATTGTATAATTTATTCTGTACCTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07876g_CDS-001

Protein length: 193 aa.
Product: Conserved hypothetical protein

>YALI0D07876g_CDS-001 MTKVKGKPKRVRISRVAGTDAPSTPQMSDQEYAAALAQQQQAYMPKNLASKAGPSSSLAN
SPATNSLAETHTVKREGGGKKWEDPSLLEWDPTHFRLFVGNLSGEVTTENVHRAFQKYKS
LSKAKVVKDKISEKCAGYGFVSFSDPDDYFKAFKEMDGKYIGNHPVQLKRAKTEIKAVAK
KKTKPYERARPY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG