YALI0D07854g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D07854g

Location

Species Yarrowia lipolytica Positions 1009946..1011975
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2030 (nuc.)
Previous locus YALI0D07832g Next locus YALI0D07876g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07854g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07854gYALI0D07854g_mRNA-001YALI0D07854g_CDS-001

Nucleotide sequence

 

>YALI0D07854g
ATGCTCTCAAACTCAACCTCTCCACCCCCCCCCCCCAGCCGAGAAAAGTCACCTCTTGAC
ACACGGCACTCTCGAGATTATAAGAAGCGGTCTCCCCACAAACACAGACACATGTCGCCC
ACGAGATTTCCCAAAATGAACAAGGAACCGGCTGCCCCTCCCGTGCCCACGAGACCCACA
GCCGTGGCTGCTCCCGTCAAACACATCGCTGTCACATTCGAACACAGCTCGAGAATGGTT
TATGGCAATTGCAAACCCACCCCCAACGTGAAAGTCTTTCCCGAGTCTGAGCTCTGCTTC
ACCCGCCGAGAGGATATTGACGAGTTTTACCAAAAGTACTTTGCAGACAAGTCGTTCAGC
TCCATTAAAAACCAGAAACTGGAGGTCTCCACTTCGCCTCATCATCTCGGCTACCAGAAA
GACACTCTGCCCTTTACTGCCATTTTGTCAACCGACCTGCATCCACGAATGAAGAATGCG
CAAGCCTGGTTTATCATGGCCAGTTCTGACCTAGATAAAAGTACAAGTACTGTGGAGATT
CAGGAGGTGCAGCGAATGATTGCCGGACTCCGACGAGACCTCGAGAACGAAAAGATTGCA
AATGCTGCCCTCATTAAGGAAGTCAAGTCCAGAGCTGCCAGAAAGGCCGAAAAGATTGCT
TCCGCGAAGGTCGAGGAGCTGACCAAGACCCATATTGAAGAGCTGGAAAAGACTCTTATG
GCCTCAGTCAACCTGCAGCTGGACAAGCTCTCTGAGGACCGAAAGTCCTCCAAGACCTCC
CAAAAGACAACCCAATGTGACTCTTCTACTTCCCCCTCCTCCAGCTCCTGCTCCATGTCC
TTCAAGCTGGCTGATGTCGGTGTCTATCCTCTGACTGACGGATCTGGTCAGGCGCGAATC
GTCGGCAAGCTGCCCGCCCATGTTGGAGCTATGCTTTTGGCTCTCGACAAGCTGCCCGAG
ATTAGAAACATCAACGGCACTGTTGCAGCCGTCAAGAACACTGGCTCGTGTCTGGAACTG
ATGGCTCAAATCAAGTTCTCCCAATGGTCCAATGAGTGGCTGTGTTCTTGGGGAGACAAC
GTCAAGGTCGCACCTAAGTTTGCCGTCGAGTCGTCCGTTTCCAAGTGCCCTCAGCCCTCT
CTCATTACCACTCTGTCTGAGGCTAATCCTACAGAGACCTCCCAGTGCCGAGTCCCCTTG
AGCCGATCTATTTCCTCCAACTCCACCTCCTCAACCAAGTCCACTACTTACACCCCCACC
TGCGCGGTTCCTCTGGCCTCTCGGCTCTCCAAGACCTCCCCTACCAACCCCCCTCGAGCC
TTCCCTGTTCCCGTCTCCGCTCCTCTGTGCCAGGTGCCTCTCTCTCGTCCTTCTGTTGTT
TCTCCTCGAATTGGCTGCTTCAAGGAAGTGCCACCGGGACTCTCTGGCGCTCAGGAGGAG
ATCCCTTGGACCATCAAGGTTGATACTCCTTCTGCCAAGCCAGATCCTCACCCTGTCTCC
GAGTCTGATGCTTTTGTGTGTGACTACTGCCTAGAACCTATCAGCGAGGCCCGATTCCAC
TGCCAGTCCTGTGTTGATTTCGACGTTTGTTCCTCTTGTTACCCCTCTCGAGCCAAGAGC
CACGCCCAGAAGCATGGCTTTGTGCAGCTCGACGTCAAGACCGGTATTCCCATTGATACT
GAAACATCTGCTTCCTCTTCCTCCGGTGACATTTCCACTTCTTCCGTGCGATTCCCCGTT
CTCAACTCTGTCTCTTCCAGTACCACTGTTGGGGTGAACACCACTGAAGAGCGACATGCT
GCTAGTGACTACTCTTCTCGGTCGTCTGCTCGATCCGGCCATTCTGGTCTTTCCTCGCGA
TCCCAGTCGCAGTCTTCTTTCGCGGATGTGACTGTTGACGATCTGCTGAGCGACATTGGA
AGCTACGAGCATGTCACTAGTGACTACCCTGATTACAGTGATTTTGAGGAGCACTTTTAG
ATCGGCTGATCGGACCCTGATATAACTACGAATGAATGATTGATAATGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07854g_CDS-001

Protein length: 660 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D07854g_CDS-001 MLSNSTSPPPPPSREKSPLDTRHSRDYKKRSPHKHRHMSPTRFPKMNKEPAAPPVPTRPT
AVAAPVKHIAVTFEHSSRMVYGNCKPTPNVKVFPESELCFTRREDIDEFYQKYFADKSFS
SIKNQKLEVSTSPHHLGYQKDTLPFTAILSTDLHPRMKNAQAWFIMASSDLDKSTSTVEI
QEVQRMIAGLRRDLENEKIANAALIKEVKSRAARKAEKIASAKVEELTKTHIEELEKTLM
ASVNLQLDKLSEDRKSSKTSQKTTQCDSSTSPSSSSCSMSFKLADVGVYPLTDGSGQARI
VGKLPAHVGAMLLALDKLPEIRNINGTVAAVKNTGSCLELMAQIKFSQWSNEWLCSWGDN
VKVAPKFAVESSVSKCPQPSLITTLSEANPTETSQCRVPLSRSISSNSTSSTKSTTYTPT
CAVPLASRLSKTSPTNPPRAFPVPVSAPLCQVPLSRPSVVSPRIGCFKEVPPGLSGAQEE
IPWTIKVDTPSAKPDPHPVSESDAFVCDYCLEPISEARFHCQSCVDFDVCSSCYPSRAKS
HAQKHGFVQLDVKTGIPIDTETSASSSSGDISTSSVRFPVLNSVSSSTTVGVNTTEERHA
ASDYSSRSSARSGHSGLSSRSQSQSSFADVTVDDLLSDIGSYEHVTSDYPDYSDFEEHF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG