YALI0D07832g

Overview

Description weakly similar to uniprot|B8M5A1 Talaromyces stipitatus hypothetical protein TSTA_029790
Locus type CDS
Locus tag YALI0D07832g

Location

Species Yarrowia lipolytica Positions 1008059..1009572
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1514 (nuc.)
Previous locus YALI0D07810g Next locus YALI0D07854g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07832g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07832gYALI0D07832g_mRNA-001YALI0D07832g_CDS-001

Nucleotide sequence

 

>YALI0D07832g
ATGATCCCGCAATTTCTCGTCGACCTATATGCGGATCTTCAAGAGGCGTTTGAGATCGGC
TCGCTAGAAAAGATTGACGAGCGATGGATGTGGCTAGGAGGCACGTGGGCCGTGTGTATG
CTGTTGGCATTTGCAGCGGTCTTCTTGATCCCCAAGGAGTACGGTGCTTTTTTGGAGAAG
CCGATGCTTTCTTTTGAGGATGACGAGACCAAGGACGCAAACGGAGCGCCTCGGGTGGAG
TCTGTGGGCGAGGACTTTGACTACACCAAGTTGGAGCCCATCAAGCATCGACCCTTCAAG
CCAGGCAAGTACAACATGACCATGGGTCTGCAAAAGTGCTCCCACAACCAAATGTTTCAA
ATGGAGAAGACGTACAAGGAGCGGGTCCAACTGCGACGAGAAACCATTGCCAAGAACCCG
CATATTGCCGTTTTCTGCGAACCTGGTGCTGATGTCGCTGCTCCAGTGGCCGAGTTCTAC
GATAAGTCCATGAGGTTTCTGGCCAAGCGGTACCCCATGTACTTTTCTGAAAACTTCAAG
ACGGGGCATATCATTAACCGTGTCTTTGACAATGAGCGGTATCCCATCTCCGGCGTCTAC
GCTCTGAAACACGGCTACAAGCCCTATGATCTGCTTCGAATTCTGTCTCGAACCGTGGAG
GAGGACTTTCTGATCATGACCTTTGACGAAACTAGCGAGCCTCCCATGTACAGACTGCGG
GCTGGCTCGTCGTGTTTCCCTGCCGGTTTCAACCCGAAGCTCAAGTGCGGTCTTACCCTT
CGAGACATTCATGGACCTGTGCCCATGTATGGCGAGAAGCTGGAGACGTCTATGAACAAG
TTTTTCAAGCGGATCAAGCCCCACGACTACGTTCAGCGTCAGAACTGGGGTATTCAGCGA
GGAACTACCATGTTTGCCATCGGTGAGTACCACGTGTACGACCAGGACAAGGTCAAGGTG
TACAAGGACGGCGAGATTGACTTTTCGGAGTGGTTTCTGCGGTGTGAAAACCAGATCCTG
ACACGTCTTCCTTCCACCGAGGCTCTAGCTTTCGTGATTCGAACCTACGTGACTCCTGTG
ACGGAGATCAAGGAAGAAGAAGGAATTCCCGAGTCGCTTTGTGCCGCCATCGATGCTCTT
CCCGAAGAGATCTATGTCTACAAGGGCGCTCAGGAGTGGGCTCCTCCCTTGAAACGTTTT
TTGAAGGGTGAGATTGACTCCCTGGGGGTTCCTGTCACCAAGTAAAAAAAAACGTCAAGT
GACTCACGTCTACTGGTCTTCAAGTGTGAGTCTAAAAGGGCCGACTTCGGGGCCGACTTT
GGACCACTTTGGGGACCACTGAGAGCCAAAACACGCTGCATTTCACGAACGTAAACGATC
TGATAAAAGCCAGATGCTGCAGCTGCATCTGATAAGTGAGAGATGAGACACGGTCCGTAC
GGAATGGACCATATGAAAGTTGAGGATGGGACGCAAATAAAACACAGTTGAATGATGATT
TTGTGTATATTAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07832g_CDS-001

Protein length: 415 aa.
Product: Conserved hypothetical protein

>YALI0D07832g_CDS-001 MIPQFLVDLYADLQEAFEIGSLEKIDERWMWLGGTWAVCMLLAFAAVFLIPKEYGAFLEK
PMLSFEDDETKDANGAPRVESVGEDFDYTKLEPIKHRPFKPGKYNMTMGLQKCSHNQMFQ
MEKTYKERVQLRRETIAKNPHIAVFCEPGADVAAPVAEFYDKSMRFLAKRYPMYFSENFK
TGHIINRVFDNERYPISGVYALKHGYKPYDLLRILSRTVEEDFLIMTFDETSEPPMYRLR
AGSSCFPAGFNPKLKCGLTLRDIHGPVPMYGEKLETSMNKFFKRIKPHDYVQRQNWGIQR
GTTMFAIGEYHVYDQDKVKVYKDGEIDFSEWFLRCENQILTRLPSTEALAFVIRTYVTPV
TEIKEEEGIPESLCAAIDALPEEIYVYKGAQEWAPPLKRFLKGEIDSLGVPVTK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG