YALI0D07436g

Overview

Description similar to uniprot|P38431 Saccharomyces cerevisiae YPR041w TIF5 translation initiation factor eIF5
Locus type CDS
Locus tag YALI0D07436g

Location

Species Yarrowia lipolytica Positions 950176..951507
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1332 (nuc.)
Previous locus YALI0D07414g Next locus YALI0D07458g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07436g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07436gYALI0D07436g_mRNA-001YALI0D07436g_CDS-001

Nucleotide sequence

 

>YALI0D07436g
ATGTCCATGATCAACATCAGACGAGATAACCCCGACCCCTTCTACCGGTACAAGATGCCT
GCCATCACCTCCAAGATCGAGGGTCGAGGTAACGGTATCAAGACTGCCGTGATCAACGGT
TCTGACGTTGCCCGAGCTCTTAACCGACCTCCTTCTTACGTCATTAAGTACTTTGGTATC
GAGCTTGGAGCCCAGACCCAGATCTCCGAGGACAAGGACCGATACCTGGTCAATGGTCAG
CACGACGCTGCCTCTCTGCAGGACACTCTGGACGGTTTCATCAACCGGTTCGTGCTCTGT
GAGGCCTGCAAGAACCCCGAGACTGAGCTCATCATCACCAAGAACGGAGACATTACCCGA
GACTGTAAGGCCTGTGGTAAGCGAACTCCCGTGGACATCCGACACAAACTCGCCACCTTC
ATCGTCAAGAACCCTCCCTCGCAAGCCAAGGGTAAGAAGGGTGCTGCTGGAGCTGCCTCC
AACACCTCTGCTCAGGCCCCTGATGTGGACGACAACGAGGACGGCGAACCCTCTGACGAC
GAGCTGACCAAGCGAATCAACGCCGAGGCATCCGAGCTTCCCGCCGCCGCTACCCGAGCC
GACGACGATACCTGGACTGTCGACACTTCTGCCGAGGCCGTTGCTGCCCGACAGCGAGAG
GTCGAGCAGGGTGTTGCCGGCATCGCCCTGGAGGAGAACGATGCCTACACCATCTTTGGA
GAGTGGTGTTCCGAGGGTGAACCCAGCGACGTGGAGATCTACAAGAAGGCCATTGAGCTG
GGTATTTCTGACGATTCCAAGACCGTCCAGGTTCTGCCCCAGGTCATTTTCGACAAGGAC
ATTGTCAAGCAGATTGATGAGCACAAAGGTCTGCTGACCAAGATTGTGGCTTCCGACGAG
CACGAAAAGGCCTTGCTTGGTGGTATTGAGCGTCTCGTTGGCCTTACCCACCCCGATCTC
ATCCCCGCCGTGCCCAAGATCCTTTTCAAGCTCTACGAGCTCGATCTCGTGTCCGAGGAG
GTGGCCAAGAAGTGGGGAACCAAGGTGTCCAAGCGATACGTCGACAAGGAGACCTCCAAG
AAGGTGCGAAAGGCTGCCAAGCCGTTCATTGACTGGCTCGATGAGGCTGAGGAGGAGTCT
GACAGTGATGACGAGTAAACGGTGCATTTGGTGCCAACTGACAAATAGAGGATAGACCTC
AAGCATGTAGCATATGTACGGAAGCGAGCAACCAGCCGTCGGCGAGTTGCGAGCGGACAA
CAACCAACAGTGACTAGCCCTAGGCGAGTGCACGACAGTATGTATAAATAAAATAAGAGT
GACTTGTGAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07436g_CDS-001

Protein length: 386 aa.
Product: Translation initiation factor eIF5, putative

>YALI0D07436g_CDS-001 MSMINIRRDNPDPFYRYKMPAITSKIEGRGNGIKTAVINGSDVARALNRPPSYVIKYFGI
ELGAQTQISEDKDRYLVNGQHDAASLQDTLDGFINRFVLCEACKNPETELIITKNGDITR
DCKACGKRTPVDIRHKLATFIVKNPPSQAKGKKGAAGAASNTSAQAPDVDDNEDGEPSDD
ELTKRINAEASELPAAATRADDDTWTVDTSAEAVAARQREVEQGVAGIALEENDAYTIFG
EWCSEGEPSDVEIYKKAIELGISDDSKTVQVLPQVIFDKDIVKQIDEHKGLLTKIVASDE
HEKALLGGIERLVGLTHPDLIPAVPKILFKLYELDLVSEEVAKKWGTKVSKRYVDKETSK
KVRKAAKPFIDWLDEAEEESDSDDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG