YALI0D06688g

Overview

Description similar to uniprot|P40088 Saccharomyces cerevisiae YER145c FTR1 iron permease that mediates high-affinity iron uptake
Locus type CDS
Locus tag YALI0D06688g

Location

Species Yarrowia lipolytica Positions 854732..856161
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1430 (nuc.)
Previous locus YALI0D06655g Next locus YALI0D06710g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06688g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06688gYALI0D06688g_mRNA-001YALI0D06688g_CDS-001

Nucleotide sequence

 

>YALI0D06688g
ATGGCCAACGCGTTTTCCGTTCCGGTCTTCTTCATTGTCTTTCGAGAGACTCTGGAGGCC
GCCATCATCATTTCGGTGCTGCTGGCCTTCATCAAGCAGTCTCTGGGCCCGGCTCCTGTG
ACGGACCATCCCGATTATGACCCCGAAAACCCCGAGAAGGATCTCAGTCCCGTGGCAACC
TCCGCCGATGACGCCTTTGCCGGCCAGTCCGAGGCTGACAAGGCTCTGCTGCAGAAGAAG
CTCATCAAGCAGGTGTGGATTGGCGCCGCTCTTGGTCTTCTCATCTGTTTCATTCTCGGA
GGCACCTTCATCGGTGTCTTCTACTCGCTGGACAAGGATCTCTGGGCTTCGTTTGAAGAC
CTGTGGGAAGGTATCTTCTGTATCATTGCTACCATCATGATCACCTTCATGGGTCTGGCC
ATGCTGCGAATCAACAAGATGAAGGAGAAGTGGCGAATCAAGATTGCCAAGACCCTGCTG
CAGAACAAGGGCGAGTACAAGGACACTTCCTTCAAGGGCCGACTCAAGAGTCTCTTCAAC
TTCCGATACAACTCCAAGAAGTACGCTCTGGGCATTCTCGCCTTCGTTACTACCCTGCGA
GAAGGTATTGAGGCCGTGGTCTTTGTCGGAGGTGTTGGACTCGGTGAGGATGCCACCGCA
TTCCCTCTTCCCGTCTTTTGTGGTCTGGCAGCCGGCGGTCTGATCGGATACTTCATCTAC
CGAGGAGGTAACTTCATGTCTATCCAGATCTTCCTCATCGCCTCCACCTGTTTCCTCTAC
CTCATTGCTGCCGGTCTCTTCTCCCGAGCTATCTGGTACTTCCAGATGTACCGATTCTCC
AAGAAGTCTGGTGGAGATGTCGCCGAGGGAGGCTCCGGCCCTGGCTCCTACAACATCAAG
GAGGTGGTCTGGCACGTCAACTGCTGCGACCCTCTCAACGACGGTGGCTGGCAGATCTTC
AACGCGCTGTTTGGATGGCAAAACTCCCCCACCTACGGCTCCGTCATCTCATACAATGTG
TACTGGATCTGCATCATTCTCGCCATTTTCGCCATGCTCTTCAACGAGAAGCACGGCTAC
TACCCCATGCTCAAGCGATGGGCCAAGACTGAGGACAAGACTGCCGACAATGCCATGTAC
GACCGGGCCGTGTTCCATGCTCGACAGGATGCTGGCGTCGAGAAGAATGCTGTCGTGACG
GAGAACTCCGCGTCTAGCAGCGACGAACGAAAGGAGGTTGCCTAAACCTGAGTGTAGCGC
AACCCAAGGTGAGAGGAAGGGTCGAGTGGTGAGAAGTCTGTCCTGACACACTCTTGACTG
GTTTCTTGAGCTCCTGATAAACTCCTCGCCCCCCAAACTCCCGCTCGCCCAACTAATAAA
AGAAGTAGTAATAATTAATGAATAACGATTTTAACGAGACACTTGACGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06688g_CDS-001

Protein length: 415 aa.
Product: High-affinity iron permease, putative

>YALI0D06688g_CDS-001 MANAFSVPVFFIVFRETLEAAIIISVLLAFIKQSLGPAPVTDHPDYDPENPEKDLSPVAT
SADDAFAGQSEADKALLQKKLIKQVWIGAALGLLICFILGGTFIGVFYSLDKDLWASFED
LWEGIFCIIATIMITFMGLAMLRINKMKEKWRIKIAKTLLQNKGEYKDTSFKGRLKSLFN
FRYNSKKYALGILAFVTTLREGIEAVVFVGGVGLGEDATAFPLPVFCGLAAGGLIGYFIY
RGGNFMSIQIFLIASTCFLYLIAAGLFSRAIWYFQMYRFSKKSGGDVAEGGSGPGSYNIK
EVVWHVNCCDPLNDGGWQIFNALFGWQNSPTYGSVISYNVYWICIILAIFAMLFNEKHGY
YPMLKRWAKTEDKTADNAMYDRAVFHARQDAGVEKNAVVTENSASSSDERKEVA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG