YALI0D06710g

Overview

Description weakly similar to uniprot|Q08646 Saccharomyces cerevisiae YOR242c SSP2 probable ABC transport permease
Locus type CDS
Locus tag YALI0D06710g

Location

Species Yarrowia lipolytica Positions 861113..862347
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1235 (nuc.)
Previous locus YALI0D06688g Next locus YALI0D06732g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06710g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06710gYALI0D06710g_mRNA-001YALI0D06710g_CDS-001

Nucleotide sequence

 

>YALI0D06710g
ATGGGTCTACGGGAGTCTCAAGAACGCAGCCGCAACAGGGAAAGCAGCCGGAACCGGGAA
GGCAACCGGCTGCGTGACAAACAACGAGGAGACTTAAGAGAGCGGGGAGAGCGGGGAGAA
CGACGAGAACGTCTCAAGTCTCGTGACAAGGAACGAGGCCGAAACCGGGACCGAGAAAAG
GACTTCAGCAACAAAGATGCCCGCAAGGAGCGATTCCGGTCCATCACCGGCAAGGACTGG
GGCAGGAACGTGACTACGGTGGACGAAGGGGCTCAACATTATGCCATTATCAAGTCGCCC
ATGGCGTACATTCCCAGTTGTGAGTATGAGTAGGAGAGGGGAGTTGAACTGTGCTACACT
GGCTTGGTTCATGTTATAGGAGACTATCTGACTTATCTGGATTTGCTCCAACTATGGCCT
GAAATAGCGTTGGTTCCATGTCTTCGACATCGCTACTGTGTGTCCTATTGTCACATACTA
ACCAAGCCATCAATTTTTATGCCGTGTCGCCGGACTCGACGAATCGCATTCTCTTCTTTA
AGGGTGTGCCTGCCTACGTGGGCGTCAACGATGTCGTCGCCCAGGCCTGCGGAGGCCCTC
TGGAAAAGGTGGTGGTCCACCCGACCATGTTTGGGGGCACTGGAGAGGAGGCCGACGACA
ACACGATCGAGTTTCATTTCGTCGAGGCCGAGCACGCCCGCAACTTTTACCACTACTCGC
GCACAGGTCGGTACATTGTCAACGGCCAGCCCTTCTGCCCCCAGTGGTTCTTCCAGGGCA
GTGACCCCATTGATCCTGAGGTGATGGTCCACATTTCCACCGAAGGCGCTCGACGAGTGT
TGGATCTGACGCTTAGCCACGGCAGCAAGGACGAGGTCGCAGCCATGATCGCCACCTACG
GTATGGGAGGCGGGCCTGGAGGACACGAGAAGAGCGGGGTAGGCGTTGGGGGGTATTCGC
GGGAAAGCAAGCGTCGGGGGGTAAAGGTCGTGAGTTTGGGCACCAACATTGCCGAGATCC
AGCGGGACTTTGAGTTCTATGGCAAGGTGATTAGCGTGGTGCCGTTGGCGACCACCCAGT
GCACCATTTCCATCCACTACGAGGATGTGTGGTCGGCCACCAAGGCGTACGCCGCTTTTA
TGCGCCGGGACTTTGTGTCTCGCAAGTACAAGTCTTGGACCATTAGCTATGGCCACGATC
CTGTTGACCGGCCCTGTCCCGGTTCGCTGTTGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06710g_CDS-001

Protein length: 356 aa.
Product: Conserved hypothetical protein

>YALI0D06710g_CDS-001 MGLRESQERSRNRESSRNREGNRLRDKQRGDLRERGERGERRERLKSRDKERGRNRDREK
DFSNKDARKERFRSITGKDWGRNVTTVDEGAQHYAIIKSPMAYIPSSINFYAVSPDSTNR
ILFFKGVPAYVGVNDVVAQACGGPLEKVVVHPTMFGGTGEEADDNTIEFHFVEAEHARNF
YHYSRTGRYIVNGQPFCPQWFFQGSDPIDPEVMVHISTEGARRVLDLTLSHGSKDEVAAM
IATYGMGGGPGGHEKSGVGVGGYSRESKRRGVKVVSLGTNIAEIQRDFEFYGKVISVVPL
ATTQCTISIHYEDVWSATKAYAAFMRRDFVSRKYKSWTISYGHDPVDRPCPGSLL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG