YALI0D05753g

Overview

Description highly similar to uniprot|P06367 Saccharomyces cerevisiae YCR031C (ohnolog of YJL191W) RPS14A Ribosomal protein 59 of the small subunit, required for ribosome assembly and 20S pre-rRNA processing
Locus type CDS
Locus tag YALI0D05753g

Location

Species Yarrowia lipolytica Positions 737755..738651
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 897 (nuc.)
Previous locus YALI0D05731g Next locus YALI0D05775g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D05753g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D05753gYALI0D05753g_mRNA-001YALI0D05753g_CDS-001

Nucleotide sequence

 

>YALI0D05753g
ATGGCCCCCAAGTCAGGTATGCAGGAGATGTGATAATTTGATTGCTAGGAGCTGGGTGAC
AGCTAATCCGCAAGGACCGCCTGACGGAGATAGATTTGCTACCTTCGTCGGTGGCTTTGA
GGAGAGCGACGGATGTGATGGACAAGGTGGGGTGAACTCGACATGATCTGTGTTGGCCCA
TCACGGAGGTTATGGTGCCCATGACATGAGCAGTGTTGTCCGCGACACGAGCAATGTTGT
CCGTGAAACGAGAATGTCATCCCACAACACCACCAGTCACATCTCAGTCACCTAAACTCG
CAGCGGTCAATGGCAGTCGGACTTTGTCCTCGTGCCTTGCCGGTTCACTACTAACTCAGA
CAACGTTACCCTCGGCCCCCAGGCCCGAGAGGGAGAGCTCGTTTTCGGCGTTGCCCGAAT
CTTTGCATCCTTCAACGATACTTTCGTCCACATCACCGATCTGACCGGCCGAGAGACCAT
CTCTCGAGTCACCGGCGGTATGAAGGTCAAGGCTGACCGAGACGAGAACACCCCCTACGC
CGCCATGCTGGCTGCCCAGGATGCCGTCGAGAAGGCTAAGGAGGTTGGTATCAACGCTCT
GCACATCCGAATCCGAGCCACCGGAGGTACTTCCACCAAGACCCCCGGCCCCGGCTGCCA
GTCTGCCGTCCGAGCTCTTGCCCGAGCCGGTATGCGAATTGGTCGAATCGAGGACGTGAC
CCCCGTTCCCTCCGACTCTACCCGACGAAAGGGTGGTCGACGAGGTCGACGACTGTAAGC
GGTTTCTTTGGGGACTTGCTGGCAGTATTTATGCCGTGTTTTCATGGTGTATGTAAAAAT
ATAAAAGCGTAAGCGTATTTAACGATTGATCCGAGTGTTTGCGAGCTCTTCGAAGCA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0D05753g_CDS-001

Protein length: 145 aa.
Product: Ribosomal 40S subunit protein S14, putative

>YALI0D05753g_CDS-001 MAPKSDNVTLGPQAREGELVFGVARIFASFNDTFVHITDLTGRETISRVTGGMKVKADRD
ENTPYAAMLAAQDAVEKAKEVGINALHIRIRATGGTSTKTPGPGCQSAVRALARAGMRIG
RIEDVTPVPSDSTRRKGGRRGRRL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG