YALI0D05775g

Overview

Description similar to uniprot|Q08773 Saccharomyces cerevisiae YOR304w ISW2
Locus type CDS
Locus tag YALI0D05775g

Location

Species Yarrowia lipolytica Positions 739192..743213
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 4022 (nuc.)
Previous locus YALI0D05753g Next locus YALI0D05792t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D05775g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D05775gYALI0D05775g_mRNA-001YALI0D05775g_CDS-001

Nucleotide sequence

 

>YALI0D05775g
ATGCACTCTCACTCACCACCGGATGGCGTTCTTAATCTCCTACCCAACCTTTGCTGCTAT
AGACCCCGCGGCCAGCAACAGCTCACCACACACGACATGAGCAGCGACACTACGCCCCAG
GTGGCGACCCCGCGCGACGAGACGGAGGAGGAGCGAATCGAGCGGTACTTCACGCTCCCG
GACGCGAAGAAACATAAAGACGTGAGTAGGACTGGCAGGTGCAAACATCAACATGGGGGT
AGTAGGGTGGTTGTGTGGATGGGGTGATGTGGATGAGGTGGTGTGTGACGTGGCCTTTAG
AATCTGAGGGTGTGTTGGTTTGAGGGGACAGACACTGCTGATCTGTGATGGTGGTAGGTG
GTAGGTGTAGGTAGGTGTGGTAGGTGCGGTAGTGGCTATGATGACTTGTGCTGTTTGCAA
GACCGTGCTGTCGATACAACACTAGCCAGCTGCTCATCGGAAACACGTGGCACAATATCA
TTCCTGCTGTGTGCTGCAGACCCATCTTTGATGTGATCGTTCAGTGCACTGGCTTCCTCC
CCCATGTCATCTACAATATTCAACAGACAGAAACTTCAGTGCAGACAGAAACATCAATGA
AGACAGAAGCAACAACGGCGCAGGCTTCCTCTGGGTTGCATATCCCACGGTGATGATACC
GGCGTTCTGACCTCCCTCCAATGGCACCCATATGCTACGTTATCCAGTTATCATTTGTTA
TTATCTGTGGGTCTTCACTGACTCCGTGCTAACTCAGGACACAAACTCGATTAAACGACT
CAAATACCTCCTCTCTCTGACCGACCTCTTCCGCCACTTCATCAACAAGCGAATGGAAGG
TGACCCCAAGTTCCGCAAGCTTGTCAATGAACTAGATCGAGCCTCCAAGGCCCAGAAGAA
AACTAGAGGTCGAGGGGGACGAGGCCGGCGAAAAACAGAAAAGGAGGAGGACGAGGAGCT
GCTCAACGACAACACGCAGATGGCCACGGTGTATACCGAGAGTCCCCCGTTCATCAACGG
TACACTACGAGAGTACCAGGTGCAGGGTCTCAACTGGCTCATTTCGCTGCACGAGAACTC
CATCTCCGGCATTCTGGCTGACGAAATGGGTCTGGGCAAGACGCTGCAGACCATTTCTTT
TTTGGGATACCTTCGATACAAGTGCGGCATCAACGGGCCTCACATTGTCATTGTACCCAA
AAGTACACTGGACAACTGGCGCCGAGAGTTTGAGAAGTGGACTCCGGAGGTGAAGACAGT
GGTACTGCGGGGTGACAAGACGGAACGAGCGGAGATCATTGCCAATGAGGTGCTGACGGC
AGACTTTGACGTGGTGATTTCATCGTTTGAAATTGTCATTCGTGAGAAGTCGGCGCTCAA
AAAGGTGGCATGGGAGTACATCATCGTGGACGAGGCGCATCGAATCAAAAACGAAGATTC
CATGCTGTCACAGATTATCCGCCTGTTCCACTCCACCAACCGACTGCTGATCACAGGTAC
GCCCCTGCAGAACAACCTGCACGAGTTGTGGGCGTTGCTCAACTTTCTGCTTCCAGATAT
CTTTTCCGAAGCCGAAACGTTTGATCAATGGTTTGAGGAGAAGGAGGCCGAGGGGGAGGA
GGGCGAAAACGACGAGGACAGTGTCGTCAAGCAGCTACACAAGGTTCTGCGTCCTTTCTT
ATTGCGACGAGTCAAGAACGACGTTGAGAAATCGCTGCTTCCTAAAAAGGAGCTCAACCT
GTACATTGGTATGTCCGACATGCAGGTGCAGTGGTACCAGAAGCTGTTAGAGAAGGACAT
TGACGCTGTGAATGGCCAGCTGGGTAAACGGGAGGGAAAGACGCGGCTGCTCAACATTGT
TATGCAACTGCGAAAGTGTTGCAACCACCCTTACCTGTTTGAGGGAGCCGAGCCCGGTCC
TCCATACACCACCGATGAGCATCTCGTGTTCAACTGCGGTAAGATGGTCATGTTGGATAA
GCTGCTGAAGCGGCTCAAGAGTCAGGGGTCCCGTGTGCTTATTTTCTCACAGATGAGCCG
AATGCTTGACATTCTCGAGGACTACTGCTCGTTCAGAGACTATGAGTACAGCCGGATCGA
CGGCAGCACTGCGCACGAGGACCGTATTGCGGCGATTGACGAGTACAATGCTGAGGGCTC
GGAAAAGTTTGTGTTTCTGCTGACTACCCGAGCTGGTGGTCTGGGAATTAATTTGACCTC
TGCCGACATAGTCATTCTGTACGACTCAGACTGGAATCCACAGGCCGATCTGCAGGCCAT
GGACCGGGCGCATCGAATCGGCCAGACCAAGCAGGTTTACGTATTCCGGTTTGTGACCGA
GAACGCCGTGGAAGAAAAGGTGCTAGAGCGGGCAGCCCAGAAGTTGCGGCTCGACCAGCT
GGTGATTCAACAGGGTCGAACGCAGCAAAAGGCCGCCGCCAACAACAGTGAGTCCAAGGG
CGACCTGCTGTCCATGATTCGGCATGGTACCGAGGACATTTTCAAGTCGTCCAAGGGAAC
GCTCAAGACGGAGGACGACATTGAGGCAATTCTACTGCATGGCGAAAAGCGAACCAAGCA
GCTTAATGATAAGTTCGCAGAGCTTGGAATCGACGACCTGCAAAAGTTTTCGACCGATTC
GGCCATGGTGTGGAACGGAGAGGACTTTCAGCACCGAGTTGGAGCCAATGGCATCGGCGC
CCCCGACCCCAACGGCAAAGGTTGGATTAACCCACCCAAACGAGAGCGGCGGGAGCAGCA
TTACGGGGTCAACTCGTACTACAAGGATATCTTTTTGCTTCAGCAGCAGCAACCTCGAAC
GATGCGGCCTCCCAAGCAGGTTCCTCTTGCTGAGCACCAGTTCTTTCCCCCAGGCCTGAA
AGCTTTACAGGATCAGGAACTGGCGTTTTACCGCAAGCAGATCAACTACAAGGTGCCGTA
TGCGGACATTGATGTTGACGCTTTGGAGGAGGGAGAGACTAAGGAGAGCAAGCGAGCAGC
TCTCAACAAGGAGATTGCGGACGCGGAGCCGCTGACGGAGGAGCAGGAGGCGCTTAAGCG
GGACTATGAGAGCGAGGGGTTTACCAACTGGACCAAGCGAGACATGAACAATCTTGTTCA
TCTGATTGGTCGGCATGGCCGGGACAACATGGAGGCTGTGGCACGTGCGTTCCGGGGCAA
GGGCGAGGAGGAGGTGTTGCGGTACGCCAAGACGTTCATGGAGCGGCACACGGAGGTCGA
GGGGTACGAGAAGTACATTGCGGTTATTGAGCAGGGTGAGGAGAAGCTCAAGCGACAGAG
GCAGCAGCAGGAGCTCATCAAAACCAAGCTCAAGGAGTGCAAGGTGCCGATGAACGAGCT
TCCTATTGTCTACCCCGCTAACAACTCCAAGCGGGTGTATTCCGAGGAGGAGGACCGGTT
CATTTTGATGATGGTCAACAAGTACGGGCTGGAGCATCCCAAGCTGTTTGAGAAGATTCG
CAAGGAGATCAAAAAATCGCCGCATTTTCGGTTCGACTGGTTCTTTCTGTCGCGCTCCAC
CTCGGAGCTTTCTCGACGGTGCACCACGCTCATGTTGACTCTGTCTCGAGAAGTTGAGGG
TCCCAGAACGATCAAGCGGAAGAGTTTGGGCAAGGGCAAGCTTGATGACGACAAGCGAAG
GAGAGAGAGCGGGACCATGACTCCCGATACCGAGGACAGAGGCACTCCCATGTCTGTTGA
GTAGGGACTAGCCGCTGGAAGGGACTTATAAATTATACATTATTATCGATGACAGTTGGG
CAGATTGAGGCAGTGCAATGGCCAACGAGCCGCCGAAGTGTCTGTTTCGCTGGCGGTATG
ACAGTTGGTGGTAATTCGGAAGGAGTAATGTCTCGTTGGCCACTTGGTGAATGGGATTAC
TGTACTTACAATCACTCCATTAGATCTACTTACGTAATTTCCATTGACCATGGGTCTGGG
CTGTGAATCCAGGCTCTATGGAGATTCCAGTTTATGTATTATTTCAAGATAGTGATACTT
GT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D05775g_CDS-001

Protein length: 1056 aa.
Product: ATP-dependent DNA translocase involved in chromatin remodeling, putative

>YALI0D05775g_CDS-001 MHSHSPPDGVLNLLPNLCCYRPRGQQQLTTHDMSSDTTPQVATPRDETEEERIERYFTLP
DAKKHKDDTNSIKRLKYLLSLTDLFRHFINKRMEGDPKFRKLVNELDRASKAQKKTRGRG
GRGRRKTEKEEDEELLNDNTQMATVYTESPPFINGTLREYQVQGLNWLISLHENSISGIL
ADEMGLGKTLQTISFLGYLRYKCGINGPHIVIVPKSTLDNWRREFEKWTPEVKTVVLRGD
KTERAEIIANEVLTADFDVVISSFEIVIREKSALKKVAWEYIIVDEAHRIKNEDSMLSQI
IRLFHSTNRLLITGTPLQNNLHELWALLNFLLPDIFSEAETFDQWFEEKEAEGEEGENDE
DSVVKQLHKVLRPFLLRRVKNDVEKSLLPKKELNLYIGMSDMQVQWYQKLLEKDIDAVNG
QLGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNCGKMVMLDKLLKRL
KSQGSRVLIFSQMSRMLDILEDYCSFRDYEYSRIDGSTAHEDRIAAIDEYNAEGSEKFVF
LLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQTKQVYVFRFVTENAVEE
KVLERAAQKLRLDQLVIQQGRTQQKAAANNSESKGDLLSMIRHGTEDIFKSSKGTLKTED
DIEAILLHGEKRTKQLNDKFAELGIDDLQKFSTDSAMVWNGEDFQHRVGANGIGAPDPNG
KGWINPPKRERREQHYGVNSYYKDIFLLQQQQPRTMRPPKQVPLAEHQFFPPGLKALQDQ
ELAFYRKQINYKVPYADIDVDALEEGETKESKRAALNKEIADAEPLTEEQEALKRDYESE
GFTNWTKRDMNNLVHLIGRHGRDNMEAVARAFRGKGEEEVLRYAKTFMERHTEVEGYEKY
IAVIEQGEEKLKRQRQQQELIKTKLKECKVPMNELPIVYPANNSKRVYSEEEDRFILMMV
NKYGLEHPKLFEKIRKEIKKSPHFRFDWFFLSRSTSELSRRCTTLMLTLSREVEGPRTIK
RKSLGKGKLDDDKRRRESGTMTPDTEDRGTPMSVE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG