YALI0D04741g - LSC2

Overview

Description uniprot|Q6CA97 Yarrowia lipolytica YALI0D04741g LSC2 Succinyl-CoA ligase beta subunit mitochondrial precursor, putative
Locus type CDS
Gene name LSC2
Locus tag YALI0D04741g

Location

Species Yarrowia lipolytica Positions 585836..587663
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1828 (nuc.)
Previous locus YALI0D04719g Next locus YALI0D04763g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04741g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04741gYALI0D04741g_mRNA-001YALI0D04741g_CDS-001

Nucleotide sequence

 

>YALI0D04741g
ATGTTTTCGCGAATTGCTGCTCGATCTCGAGCTGTTCGACTTAATCAGGTGAGTATTTGG
CGCCACAGCCCGCCACAATGGCTCCTACCGGTGTCTGTTTCCGCCGACAATTGTCCTGTT
TTTCCGGTGCGCGTTTTTCGGCGTTTGTGGTTACACATGTCCAGACGCTCGGAAACCACG
CTGGGGTCTTGTGAACGACACACCGGCAACGTACATCTGTGGATCATGGGCAATTGAGTC
GCAAACCACCTCGCCACATTCGTCTTGTTATCTCCAACGGCCTGTTCATTGTCGTCCGGA
AAAACGCCTCGGCTAAATGCACATGCATGCACATAATATGAAATTCGTGCGTGCAGAGGG
ATAATGAGCATGGGCAGGACCAACACAAGCGCAATGCCATTCTCATCGAAGTGGCAATTG
ACCCCATCGACTGGGGTTCTCTTGAGCCGTCCCTTGACACTGCGTATCTCCCCGTTGTCC
AAAAAAGAAATTAATCTCACTAACCACAGGTCGCCAAGACTCAGACTCGAAACCTCTCTC
TCCACGAGTTCCGATCCGCCCAGATCCTCCAGAACTACGGTATCGATGTCCCCAAGGGAG
GCGCCGCCACTACCCCCCAGCAGGCTGAGGATATTGCCAAGAAGCTTGGATGCGAGGATA
TGGTCATCAAGGCTCAGGCTCTGACCGGTGGCCGAGGTAAGGGCCACTTCGACAACGGCC
TCAAGGGCGGTGTCAAGCTCATCTCCTCCCCCACCGAGGCCAAGATGTACGCCGAGCAGA
TGCTCAACCACAAGATCTTCACCAAGCAGACCGGTCCCCAGGGTAAGCCTGTGACTGCCG
TCTACGTTGTGGAGCGAGAGTTTGTGCGACGAGAGGCCTACGTTGCCATCCTCATGGACC
GAGCCACCCAGAAGCCTATCATTGTCGCTTCTTCCCAGGGAGGTATGGACATTGAGGGTG
TTGCCGCCGAGAACCCCGATGCCATCCACACCTTCCCCGTTGACATCCACACCGGTGTCA
CCGACACCCAGGCCATTGAGGTCGCCAAGGCCCTCGGTTTCTCCTCCAAGGCCACCCAGG
AGGCTGCTGACGACATCAAGAAGCTCTACAAGGTCTTCACCGACAAGGACGCCACCCAGA
TCGAGATTAACCCTTTGTCTGAGACCACCGACCACCGAGTGGTTGCCATGGACGCCAAGC
TCGGCTTCGACGACAACGCCTCTTTCCGACAGGAGGAGGTCTGGTCCTGGAGAGATCTGA
CCCAGGAGGACCCCGAGGAGATTGAGGCTGCCAAGCACGGTCTTAACTTCATCAAGCTCG
ACGGAAACATTGGCTGTCTTGTCAACGGAGCTGGTCTCGCTATGGCCACCATGGATATCA
TCAAGCTGTACGGAGGTGAGCCCGCCAACTTCCTCGACTGTGGTGGAGGAGCCACTGCCG
ACGCCATCAAGAAGGCCTTCGAGCTCATCACTTCCGAGCCCGGTGTCACTGCTATCTTCG
TCAACATTTTCGGTGGTATTGTCCGATGTGACAACATTGCCAAGGGTCTGATTGCTGTTG
CTCAGAACATGAACCTCAACATTCCCATTGTTGCCCGACTCCAGGGAACCAACCTCGCCG
AGGCCCAGAAGCTCATTTCCGACTCTGGCCTCAAGATTTTCTCTTTTGGCGATCTTGATG
AGGCTGCCCAGAAGGTCTGCCAGCTCTCCAAGGTTGTTGAGATGGCCCGAGAGATTGACG
TTAACGTCTCCTTTGAGCTGCCTCTTTAAGCGCGCTTAGAGACCAAGTTATGAGTAGTAA
TAGATATGTTATAGATAGACGTGAGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04741g_CDS-001

Protein length: 436 aa.
Product: Succinyl-CoA ligase beta subunit mitochondrial precursor, putative
Gene: LSC2

>YALI0D04741g_CDS-001 MFSRIAARSRAVRLNQVAKTQTRNLSLHEFRSAQILQNYGIDVPKGGAATTPQQAEDIAK
KLGCEDMVIKAQALTGGRGKGHFDNGLKGGVKLISSPTEAKMYAEQMLNHKIFTKQTGPQ
GKPVTAVYVVEREFVRREAYVAILMDRATQKPIIVASSQGGMDIEGVAAENPDAIHTFPV
DIHTGVTDTQAIEVAKALGFSSKATQEAADDIKKLYKVFTDKDATQIEINPLSETTDHRV
VAMDAKLGFDDNASFRQEEVWSWRDLTQEDPEEIEAAKHGLNFIKLDGNIGCLVNGAGLA
MATMDIIKLYGGEPANFLDCGGGATADAIKKAFELITSEPGVTAIFVNIFGGIVRCDNIA
KGLIAVAQNMNLNIPIVARLQGTNLAEAQKLISDSGLKIFSFGDLDEAAQKVCQLSKVVE
MAREIDVNVSFELPL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG