YALI0D04224g

Overview

Description some similarities with uniprot|K5W4S2 Phanerochaete carnosa hypothetical protein PHACADRAFT_162521
Locus type CDS
Locus tag YALI0D04224g

Location

Species Yarrowia lipolytica Positions 528411..529332
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 922 (nuc.)
Previous locus YALI0D04202g Next locus YALI0D04246g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04224g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04224gYALI0D04224g_mRNA-001YALI0D04224g_CDS-001

Nucleotide sequence

 

>YALI0D04224g
GACCACCGCATAACACAACACCCCTCAAACACGCCTCAAAACACCCCCAAAACAATGTCC
AACTCGAATTCTCTCTATCTCCTCCCCAATCGTGAGGACTCCATATCAATGGAACCCCCT
AATCCCAAGAATAATTTAGTTGAGGCCGAGTCGGCTACTACCCTGGCGTCCTGCCAGGTG
GTGTCGGCTGTGGCGGCCACCAACTTCTCTTACTGCGCTCTGCCGGCTGGGGTACCAGAG
TGGCACTCCTGAGGGAACTCGGAGTCCAAGTCCCGTAGACTTGTCTAGGGCATCACTGGA
ACTTTCCGAACTGTGTGAGAGACAGTTCAGAAAAGGAGCAGTGATCAGTTCCATCGCGGA
ACAACCGGCGGACGACGTGAGGGCCCGCTCCCGAATGGGCTCCTCGTCTTCCTACGCCTC
CACTTTTTCTCTGCCGTCCGTGTCGTCCGCAGGCACGTCGCCAGAGAGCCCTTGTAGTGT
GGGCGTGTACGGAAAGGGGGTGGCGGCAGGACCATTCGCGTCTTCATCGACTTCTGCCGC
CGCCGCCGCCGCTGCATCTATCAAATACACCCGACTCACCGAGTTTGGCTCCAACCAGGA
ATGGATCGGATTCATTGAGAACAATGTCTTCCACCAGTTTGTGTCCATTCCTCGAGACGC
CGATTGGAGCCAGCTCAAAGAAAGCGTGATTGCCTTGCTGGACCTGGCATCCGACTGCCT
TGAGTGCACAGGCATGGTTCTATATTTGGATCGTGAATGCACACACTTTCAGTCCTTGCT
ACGAGACTTTATGTGGGTCGGCTTCACCCCGAAGACCGCGGGCGTCATTTCGGAAAAGTG
GGTCATGTTGGGCATGGATTTGTAGTCCAACAGTAGCATGACGAGTATATAGTGTTTTAT
GAATTTAATGTGTATACAAGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04224g_CDS-001

Protein length: 157 aa.
Product: Conserved hypothetical protein

>YALI0D04224g_CDS-001 MGSSSSYASTFSLPSVSSAGTSPESPCSVGVYGKGVAAGPFASSSTSAAAAAAASIKYTR
LTEFGSNQEWIGFIENNVFHQFVSIPRDADWSQLKESVIALLDLASDCLECTGMVLYLDR
ECTHFQSLLRDFMWVGFTPKTAGVISEKWVMLGMDL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG