YALI0D04246g - PXA2

Overview

Description uniprot|Q6CAB6 Yarrowia lipolytica YALI0D04246g PXA2 Subunit of a heterodimeric peroxisomal ATP-binding cassette transporter complex (Pxa1p-Pxa2p), putative
Locus type CDS
Gene name PXA2
Locus tag YALI0D04246g

Location

Species Yarrowia lipolytica Positions 529540..531825
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2286 (nuc.)
Previous locus YALI0D04224g Next locus YALI0D04268g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04246g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04246gYALI0D04246g_mRNA-001YALI0D04246g_CDS-001

Nucleotide sequence

 

>YALI0D04246g
ATGGACCGTCTCAAAACGTCGGCTGTGGGCCAAAAGGTGGTGTCGTACGTGAGCGCGCGG
TCGCCCGTATGGGGCGCGACCTATCTGCGCCACAGATCGAAAATCCTCTGGTCTATCTAC
ATGGTGCTTTTTCTGTCCAATTTTGCTGGAGTGGGCTCCAAGCGCAGCAAGAAAAAGGCC
AGGAAGGAGGAGAAGGAGGAGGAGCGCAAGGCCGAGCGCGAGGTGCTGGGCTCGGCCAAC
GCCATTCCGGAAAAGAAGGTCAAGAGCGAAATCAACAGAGAGTTCTTTCTCAAGTTCAAA
CGGGTCATCAAGGTCATGTTTCCGAACGGCCTGCGATCCAAGGAGTTCTGGCTGCTGTGT
CTGCACACCATGTTTCTCATCATGCGGTCCGTCATCTCTCTGTACGTGGCCAATCTGGAT
GGTAAACTGGTTTCCGATCTGGTCAGAGGTAAAGGCCGGGCCTTTCTGTGGGGAATTGTC
TGGTGGATGGTTGTGTCTGTGCCCGCCACCTTCACCAACTCCATTCTCTCCTACCTCCAG
TGCATTTTGGCGCTGAGATACAGAAACAACCTGACCCAGCACATTGTGGGCGAGTATCTG
CCCGAAAGCGGTAACCCCGTCTACTACTCGATCCATAATCTCGACGACCGAATCAAAAAC
GCTGACCAGCTCATCGCCGTTGATGTTCAACGGCTCTCACACTCCGTTTCCCATCTCTAC
TCGAACCTCGCAAAGCCCACGCTCGACATGTTCCTCTACTCGTGGTCGCTGTCTCGAAAC
CTTGGAGGAGAAGGCATGCTTTTGGTAGGTTTCCTGATCCAGGGCTCCGCCGTCGTCATG
CGAGCGCTCACACCTCCCTTTGGCCGATACGCCGCCACCGAGGCAGCCCTGGAAGGAGAG
TTCCGATTCGAACACACTCGTCTGATTGAGTACGCTGAAGAGGTTGCACTTTACAACGGC
CAGGAGCACGAGAAGACAATTCTCGACAAGGGATACTTTGCGCTGATTAAACACAAGAAC
CGAATTCTCGTCCGACGACTGTACCATTCGTTCATGGAGGATTTTATCATCAAGTACTTC
TGGGGAGCTCTGGGTCTGGCTCTCTGTTCCATCCCCATCTTCTTCAAGGTACCTGGCGTG
GACGTTGCTTCTGCCGCAGCCTCTGGCTCCCGAACGGAAAAGTTTGTCACCAACAGACGA
ATGCTTCTGTCGTGTTCCGACGCCTTTGGCCGAATCATGTTTTCGTATAAGGAGATTGCG
CAGCTGTCCGGCTACACTGCCCGAGTGGTGGCGTTAATGGACGTAATGGAGGATATCAAG
CATGGCAACTTTGACAAGAACCAGATTTCCGGCAAGCAGGTGGACGCCCGGCACGAAAAG
ACACTGGCTTCTGTCACTGAGTCGTCGCTCGTCAAGACCCGATACTCCGACCCCTCTGAG
GCTTCTGGAAAGACCATCATTGGCTCGGACATCATCTTTGACCGTGTCCCTGTGGTTTCT
CCCTCTGGCGACGTGCTTGTTCCGGAGTTGTCGTTTGAGGTCAAATATGGGCGCCATCTA
CTCATCGTGGGACCCAACGGATGCGGAAAGTCGTCTCTGTTCCGAATTCTCGGAGGACTG
TGGCCCGTCTACGCTGGTACGCTCACTAAACCTCCCTCATCAGATATCTTTTACATTCCC
CAAAGACCTTATCTCTCTCGAGGTACTCTTCGACAGCAGGTCATCTACCCCTCTACCGAG
GCCGAGAACAAGACTTCCGACAAAGAGCTGGAAGAAATTCTCAAGATTGTCAAGATTGAT
CACATTGTGGAGGCTGTTGGAGGCTGGGATGCCGAGCGAGAGTGGCGAGAAGACCTGTCC
ATGGGCGTACAGCAGCGAATCGCTATGGCGCGTCTCTTCTACCACAAGCCGAAGTTTGCC
ATTCTCGACGAGTGTACTTCTTCGGTGACCGCCGATATGGAGTATGTCATGTACACGCAT
TCTCAGGAGCTGGGCATTTCTCTGCTGTCTGTGTCGCATCGAACTTCGTTGTGGAAGTAT
CACGATCTTATTCTCCAGTTTGATGGCCAGGGTGGTTATCTCTTTGGCGACCTGGACCCC
GAAGAGCGACTCAAGGTTGAGGAGGAGAGCCGACAGCTGGATGCTTACATTCGAAGCGTT
CCTGATATGGAAGAACGTCTAGCAATGCTCAAGGCGTCTGTTGCTCAGTAGAAGGGTGCG
AAGATTACGACGATGGTGATGGAGGTTCACAGCATATATTTTTATACAATCATTTTTGCA
ACTTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04246g_CDS-001

Protein length: 737 aa.
Product: Subunit of a heterodimeric peroxisomal ATP- binding cassette transporter complex (Pxa1p-Pxa2p), putative
Gene: PXA2

>YALI0D04246g_CDS-001 MDRLKTSAVGQKVVSYVSARSPVWGATYLRHRSKILWSIYMVLFLSNFAGVGSKRSKKKA
RKEEKEEERKAEREVLGSANAIPEKKVKSEINREFFLKFKRVIKVMFPNGLRSKEFWLLC
LHTMFLIMRSVISLYVANLDGKLVSDLVRGKGRAFLWGIVWWMVVSVPATFTNSILSYLQ
CILALRYRNNLTQHIVGEYLPESGNPVYYSIHNLDDRIKNADQLIAVDVQRLSHSVSHLY
SNLAKPTLDMFLYSWSLSRNLGGEGMLLVGFLIQGSAVVMRALTPPFGRYAATEAALEGE
FRFEHTRLIEYAEEVALYNGQEHEKTILDKGYFALIKHKNRILVRRLYHSFMEDFIIKYF
WGALGLALCSIPIFFKVPGVDVASAAASGSRTEKFVTNRRMLLSCSDAFGRIMFSYKEIA
QLSGYTARVVALMDVMEDIKHGNFDKNQISGKQVDARHEKTLASVTESSLVKTRYSDPSE
ASGKTIIGSDIIFDRVPVVSPSGDVLVPELSFEVKYGRHLLIVGPNGCGKSSLFRILGGL
WPVYAGTLTKPPSSDIFYIPQRPYLSRGTLRQQVIYPSTEAENKTSDKELEEILKIVKID
HIVEAVGGWDAEREWREDLSMGVQQRIAMARLFYHKPKFAILDECTSSVTADMEYVMYTH
SQELGISLLSVSHRTSLWKYHDLILQFDGQGGYLFGDLDPEERLKVEEESRQLDAYIRSV
PDMEERLAMLKASVAQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG