YALI0C08228g

Overview

Description similar to uniprot|P47159 Saccharomyces cerevisiae YJR124c, putative Multidrug-efflux transporter
Locus type CDS
Locus tag YALI0C08228g

Location

Species Yarrowia lipolytica Positions 1101628..1103062
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1435 (nuc.)
Previous locus YALI0C08220g Next locus YALI0C08250g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C08228g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C08228gYALI0C08228g_mRNA-001YALI0C08228g_CDS-001

Nucleotide sequence

 

>YALI0C08228g
ATGTCTCGAGATTCTGAAACGAACGAAATGTCCAGGTTTGACCGGTTCATTCGGGAAATC
GGATGGCACTCGCTCGTGAACTCTTCATGTGACATCAAGATCCTCATTGCACAAAAAGTG
CTGCGGATGATCGCCTACGGTCAGAGTACTTTGATTCTGGTGCAGTTTTTCCGTGAAATA
CACGTGTCCGACGTTGGTCTCGGGTACTTTATGACCCTGACTCTGCTTGGAGATGTAATC
ATTAGCTACTTTTTGACATTGTACGCCGACCAGCTTGGACGGCGCCTTGTGCTCCTCCTT
GGTTCGTTTCTCATGATGGTCAGCGGCATAGTTTTTGTATTTTCCGACCACTTTGTAGTG
CTGTTGATAGCAGCCATCGTCGGTGTAATTAGCCCTTCTGGAGACGAGACGGGTCCCTTC
AAGTCCATTGAGGAGTCTGTAGTAGCCCATCTCACTCCAGCCAAAGAGCTCTCCGACATC
TACGCCTGGTATGGGCTGTTTGGCACGGTCGGAAGTGCACTTGGAAGCGTTTCTGCGGGC
ATCATGATTGATGGACTTGTTGCAAACTTCGGATGGACGCAGTTGAAGGTGTATCGGTTC
ATGTTTGCCCAGTACGCTCTGCTGGCATTTTTGAAACTGATGCTCAACTGGTTTCTCACA
GATAAGTGTGAGATCGACCCAGATAACAATGACAATGAAGAACACGAAGCTGGTCTTCTT
TTCGATACCCACGATCATTATCACCAACTCGAACACGAAGCTGATCAACTCCATGGTTCC
AAATTCTCCATCTGGGGAACACCTCTCAGTCCCAGGAGCACATCAGTTGTGTGGAAACTA
TGCATTCTTTTTGCTCTGGATTCAATGGGCTACGGCTTCATGCCCATCTCGTGGGTGGTG
ACCTATTTTTTCGACCGATGGAAGGCAAGCGAAGTCACTGTCGGCACCCTCTTCTTCTTC
ACCAGCGTGCTCAACGCTCTTTCCTCTCTGGCATCTTCGTCCATGTACAAACGTCTGGGA
CCGATCTTTGCCATTGTGGCTACCCATTTCCCCTCTGCAATGGCCATGTCCTTCATCCCC
CTGGCCCCTACCATGGGAATTGCGATGGGCCTTCTTCTCTTCAGAGCATCCACTGCTGTC
ATGGACGTAGTTCCCAGACAAGCGTTTCTGTCCCATGTGGTCTCGTCCTCTGAGCGAACC
AAGGTTATGGGCATTGTCAACGTGGTCAAGACTCTGGCCCGATCTGTGGGTCCCATCTTC
ACTGGAATGTTTGCCCAGCGAGATATTCTCGGCTTTGCGTTCTTGATCACGGGCCTCTTG
GAAGCTGCCCATGACCTGGGAATGCTCGGACTCTTCTGGAAGTATAACCGGATCATTGAG
CATTAAATGAAGTCCAAGTACATACTGATACTTCGACAGTATATTTCTCATAAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C08228g_CDS-001

Protein length: 462 aa.
Product: Conserved hypothetical protein

>YALI0C08228g_CDS-001 MSRDSETNEMSRFDRFIREIGWHSLVNSSCDIKILIAQKVLRMIAYGQSTLILVQFFREI
HVSDVGLGYFMTLTLLGDVIISYFLTLYADQLGRRLVLLLGSFLMMVSGIVFVFSDHFVV
LLIAAIVGVISPSGDETGPFKSIEESVVAHLTPAKELSDIYAWYGLFGTVGSALGSVSAG
IMIDGLVANFGWTQLKVYRFMFAQYALLAFLKLMLNWFLTDKCEIDPDNNDNEEHEAGLL
FDTHDHYHQLEHEADQLHGSKFSIWGTPLSPRSTSVVWKLCILFALDSMGYGFMPISWVV
TYFFDRWKASEVTVGTLFFFTSVLNALSSLASSSMYKRLGPIFAIVATHFPSAMAMSFIP
LAPTMGIAMGLLLFRASTAVMDVVPRQAFLSHVVSSSERTKVMGIVNVVKTLARSVGPIF
TGMFAQRDILGFAFLITGLLEAAHDLGMLGLFWKYNRIIEH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG