YALI0C08220g

Overview

Description some similarities with uniprot|P25618 Saccharomyces cerevisiae YCR017c CWH43 Putative sensor/transporter protein involved in cell wall biogenesis
Locus type CDS
Locus tag YALI0C08220g

Location

Species Yarrowia lipolytica Positions 1099873..1101490
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1618 (nuc.)
Previous locus YALI0C08206g Next locus YALI0C08228g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C08220g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C08220gYALI0C08220g_mRNA-001YALI0C08220g_CDS-001

Nucleotide sequence

 

>YALI0C08220g
ATGGGCTCTTACAAGGAAAAACCACAGTTTATTGTGAGTATGAGAAAGGTTGAAGTCACG
TGTGGAGTCACGTGTGGAGTCACGTGGACTGACAAAATGGACCTACGTGGAATGTGAGAG
GGGGAGCATGATCTGGGGTTAAGACACTAGTACATCAGTCATGGGAGAGTGGATGGATCG
GTTGTTGTTTTGATCTGGCCATTTTGATGTGGAGAAAGTGCTTTCTCGGAGGATTTGTGG
TTCTTGGAATGGAACAGTCGCTTTTCTGATCTGGGACGAGGAAGGAATGACCTCATAAGT
TGGTTGTTTCGACAACTGTGGGGAAATGGATTTGATTCGGGAATTATTGAGCGGTAGGGT
ATGCTGGTTATGGTCATTATCTATTCCAACCGGGTCTGGGTGAGTCGCGCTGTGTTGGCG
GCAGCCAAAGCACTCACGCCAGAGACATTGATATTGCAATCTAGACGAGAGCACCAGTTC
ATAGTCTGTCGGTCATCCTTGATTCACCCTGAAAAGTTAACTCAATCGAGCTCGACCTAT
ATGCTTCTAGTCTTCGACATACAACATTCACATGGTGATCCGCACGCTCCTCTGGACACA
TGGTCTAGTCCAGTCTCTCTCATGATATCTCCCAGTATTAGTTTCTACCATATCAATACG
TTGGTTTGTCCTCAATTGTACTAACTCAGCTACAAGCACCGTGGATCCCTATAATATCCA
CATTGGGAACCGCGGCGTCCTACTTCCTCGCGTTTGTAGTTGGTTCCTTTCTGCATTTCC
GCCACCATTCCGAGGAGGCCTTTCCCGGCCTCTCCAGCGTCATTGGTGGCAAGTATCCTG
AGCGCAGCATTTTTCAGATCGGTATGGCAATCTTTCTTGGTGAGTTTTTTAAAGATTGAA
CGCTGATGGAGCACCCAGGGATTGGATGTGTTCTTGCTGTTAGACTGTCATTATGTGATA
CAGATCCCCCAGCATTGGTTCCCATACTAACAAATCCAGGCCCCCGAATTATTTCCACGC
TCCTGTGGTCACAACTAGGAGCTACATCTGAAAACACCATTCTGTCTAACATTGGTCTGT
TTGGCAGCCTGAAGATAATTTCTTCGATTTTCTTCACTTACGTGTCTATCGCTGATGACC
CCGCTGTGCACCACTACGCCCTGGTGTTCTACGTGGCATCTACTGTGGCATGCATGTACG
CCCAAACGGTGTACTCTGTGTGGAAGAAAAGCCCTGCCACCAAACCCCGAGCCATCACCT
TTGGCCTGTACATGCTGTTGCTGATTGTGGTCACCAACTACTCTATCAAGCACATGCTGT
ATGAGGAGTCTGGAGCGTCCACCAAGCTCTCATTGGTCGAATGGATGCTTGTGGGTCTCG
ATGTTTCGTTCGACTACTATTCCACAGTCGACTTTGAGGGCATCAGACTGGAAGTTGCCA
ACCAGAAACGCATGGTTCATTTCATGGTGTAGCAGCTCTTGAACACACTATCTTTGAACA
CACACTACACTAATATCTAAAGGGGGAGAGGAATAAGCAAAGCAAGGGCGACGAAAAGGG
ACCACAAATGATCAAAAGTGACGAAGAAATACAGTTAATATACATGGAGTATTCAGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C08220g_CDS-001

Protein length: 232 aa.
Product: Conserved hypothetical protein

>YALI0C08220g_CDS-001 MGSYKEKPQFILQAPWIPIISTLGTAASYFLAFVVGSFLHFRHHSEEAFPGLSSVIGGKY
PERSIFQIGMAIFLGPRIISTLLWSQLGATSENTILSNIGLFGSLKIISSIFFTYVSIAD
DPAVHHYALVFYVASTVACMYAQTVYSVWKKSPATKPRAITFGLYMLLLIVVTNYSIKHM
LYEESGASTKLSLVEWMLVGLDVSFDYYSTVDFEGIRLEVANQKRMVHFMV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG