YALI0C04796g

Overview

Description weakly similar to uniprot|P46996 Saccharomyces cerevisiae YJL163c
Locus type CDS
Locus tag YALI0C04796g

Location

Species Yarrowia lipolytica Positions 628526..630402
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1877 (nuc.)
Previous locus YALI0C04774g Next locus YALI0C04818g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04796g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04796gYALI0C04796g_mRNA-001YALI0C04796g_CDS-001

Nucleotide sequence

 

>YALI0C04796g
ATGGACACACACGGAATAACCGACACGGTGGACGAGCTGACCCGTCAGAACCTCGAATCG
GACGAGTGCCAGCCTCTTCTTCCTCCCGAAGAAACCTGCGATGAAGAGAGCGACTGTCCG
GACTCTATTCTCAAGCCCAAGTACGCCAAAATGCCCTACGCAAAGCGACCTAGCCCAACG
GTGCTCATCGTCGCCTTTGCCATTTACGCTACTGCCATCATTGCCTGGAGTTTGATGAGT
ATCAATGTGCTGATCAACCTTGTATGTCAGCGAGAATACGGCAGCGAGAGCAGCAACAGC
GGCACCGCCGGCAGTCTGATCTCCATTCTGGCCGCTCCCATTGTCGAGAACCCGGCTCTA
TGCCAAACCCCACTAGTGCAGAAGAAAACTGCCCGGTTCCAAATCGTCATGGAGACTGTG
CAGAGTCTTGTTGCCATGATCACCGTCACACGACTGGGCGAGCTGTCCGACCGAATTGGC
CGAAAGCCGCTACTTTTGTGGTGTGGAGTGTGCACCGTTTTGAACGCTCTCATCTGGCTC
CCCTGTGTGCTGTTTGGATGGCATTACTACACTCTGGTTGCTGGCTCCTTCTTCACGGGT
CTATCTGGCTCAGTGCCCATGCTCATGGCCATGAACCACTCCTATGCTACAGATGTGGTT
CGCTCCAAGCACCGAGCAAAGGTGTTTGGATACATGCACGGAGCCATCTTTGCCGGAGCA
GCTCTCGGTCCGTTCGCGGTAGGCCGAATCACCCGAAGCTGGGGAATTGTCGCCGCCATG
GGCTTCTCGCTGTCGCTACAGATGGTCTTCTTGGGTATCATCTTCTTCCTTGTTCCCGAG
TCACGTTCTAAACTCAAGCGAAAGTACTCCACTCACTTCAAACGAGTCAACAGTAGAAGT
CGACTGGCAGGATCCAGTGGACGAAACAACTCGGGAGTGTTTGCTGACGATACTTCTGGA
GTACGAGATCCCAACAAGAACAAGGTGCGTATCTCCATTGTCGAGGAGGCCTCTCAATCT
GCTCCTGATCTGAGAACTCCTGACTTCAGCGGTAATCATAGCAGCGGTAACAGCGACAGT
GACTCTGGCAAGAAGGGCAGGGTTTCCAAGTCTGTGGCTGCTGTCAAAGAGCACTTCGAG
TCTCTGTCCATTCTATCCTTCTCCAACCGGTCTCGATCTACTCGAATCAACGCCTGGATC
ATTCTGTCCATTGACGCGTTCATGTACTGCTCGCAGGTTGGAGTGGTGGGTCTGCTAGTG
CTCTATTCTGGCTTCCGATTCAAATGGGGAACCGAGCAGACTGGAAACATGATCAGTCTC
ATGGGTCTTTCCAAGGTCCTGGCTGTCATGCTGTTCATGCCCGTGGTGATGGGCATTCTG
AACCGAGTGTTTGTAACCCGTCTGAACCATATTGACATGACCGACCTGTTTGTCATTCGT
CTGGGTATGATTGTGAACTGTATGGGTTGGTTTGGAGTGGCCACGGCCACGTCAGGCACG
CTCTTTTTGATCGCTGTGGCCTCCATGTCTCTTTCTTCCACTGCCTCCCCCACTCTACAG
AGTGCTCTGGTGAAGTATATTGACAGAAAGGACACAGGCCGGCTTCTGGGAGCGCTGGCA
CTACTGCATCACATTTGCTCGCTGCTGGCACCCATTGTGTTCACCAGTATCTACACTCTC
ACGGTTGACACGCGCCCCGAGCTTTGCTTCTACATTGTCAGTGGCATTTTCGCCTCCATG
TTCGTTGCCACCTTGTTCATTAGTCATCCCAGCGATGATGAGTAGGTGAAGACGTAAATA
TATGATGAGGGATAGAGTACAAGTATTTAATGAGTAACGAAATCGAAAAGTAATAATGCA
ATTTAACTAACAACAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04796g_CDS-001

Protein length: 595 aa.
Product: Conserved hypothetical protein

>YALI0C04796g_CDS-001 MDTHGITDTVDELTRQNLESDECQPLLPPEETCDEESDCPDSILKPKYAKMPYAKRPSPT
VLIVAFAIYATAIIAWSLMSINVLINLVCQREYGSESSNSGTAGSLISILAAPIVENPAL
CQTPLVQKKTARFQIVMETVQSLVAMITVTRLGELSDRIGRKPLLLWCGVCTVLNALIWL
PCVLFGWHYYTLVAGSFFTGLSGSVPMLMAMNHSYATDVVRSKHRAKVFGYMHGAIFAGA
ALGPFAVGRITRSWGIVAAMGFSLSLQMVFLGIIFFLVPESRSKLKRKYSTHFKRVNSRS
RLAGSSGRNNSGVFADDTSGVRDPNKNKVRISIVEEASQSAPDLRTPDFSGNHSSGNSDS
DSGKKGRVSKSVAAVKEHFESLSILSFSNRSRSTRINAWIILSIDAFMYCSQVGVVGLLV
LYSGFRFKWGTEQTGNMISLMGLSKVLAVMLFMPVVMGILNRVFVTRLNHIDMTDLFVIR
LGMIVNCMGWFGVATATSGTLFLIAVASMSLSSTASPTLQSALVKYIDRKDTGRLLGALA
LLHHICSLLAPIVFTSIYTLTVDTRPELCFYIVSGIFASMFVATLFISHPSDDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG