YALI0C04818g

Overview

Description some similarities with uniprot|P34248 Saccharomyces cerevisiae YKL100c similarity to C.elegans hypothetical protein
Locus type CDS
Locus tag YALI0C04818g

Location

Species Yarrowia lipolytica Positions 631574..633371
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1798 (nuc.)
Previous locus YALI0C04796g Next locus YALI0C04840r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04818g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04818gYALI0C04818g_mRNA-001YALI0C04818g_CDS-001

Nucleotide sequence

 

>YALI0C04818g
ATGGTCTATCTTGACATTTATCAGACTGCCATCTCACTAACAGACGCAATGAACAACTCG
ACGGTTCTGCAAGGAAAAGTTGCGGAGATCGCATCACGTGTTCTAGACAAGATTCCAGAT
CACGTGAAGACACAGGTGGCCGATCACGTGACTAAGCTGACGGACATTGGCAAGTTTTAC
TACGACAACAGAAACGATTACACCAGCACCGTGACTGATCACGTGATCTCATACTACGAC
AAGGTCGCCACCTGTGCTGGGACCCACTATGCTCAATTGGGCAATGCCGTCACCATGTGG
ATGCATGATCTGCCCTTTGACGAGCAGATTCTGATTTTCTCGTTTCTCATGGTGGCTGCT
GTCGCCGTGGTTTATGCCGGAGCCAAGGCCGGTGTGTGTCGACCTTTTGGATCACGTGAC
CCTGACGAGAATTCGGAGCTTTTCCACATCTGTGATCTTCAGGAGACTCAGACTGAGTCT
GTTGGAGATTCCGAGGCTCTTTTCATGCCTGTTTTCGGAGGTCTGTTCCTTTGCGGCTTG
TATTTTGCCATCAAATACCTGTCCAAGGAGACTGTACAGTGGTTCTTGACCCACTACATG
AGTTTTGCCGGCTCCATGAGTGTCGGATTGGTGGTTTCCATGGGATACAAGGGTCTCCTC
AGAACCGTGTTCAACAGCAATGTGGCTCATTACAAGATTGTTCTGTGTGACGATCGGGCA
TACCGAGGTGTTGGAAGCTTTTCTCGATCCGATATCGAGCAGATGGAATGTGATAAGGCC
GAGAAGGCTGATGGAGAAAAGAAAAACTCGAAATCCAAAGCCAAGAAGAAGTCCAAGAAG
GATAAGACCGTATCAAAAGGAAAGAGCAATGCTGGTGGAGTTGGAAAGGCTGTTGAAAAG
TCTGATAGCGTTGTGGCTGTCGTTGAGAGTGCCAAAAACACGCCCACCAAGGGCAATAAG
AAGTCCAAGAAGGATAAGAAGGGAGAGACTGGACTCAATGGCTCTCAGCGAGCCGGCAAA
ATGTCTGACATTGATGACAGCTTCAAAACAGAATCCAAGAAATCCAAGTTCAACCTTATG
GCCAAGTACTTTCCCATCATCACCACCGACGACCAGCTGTATGCCATCCATTTCACTGTT
GTTGACATCCTGTGCTTCTTCCTGTCTATTTTCTGTCTCCTCTCCATGATCAAGTACCCC
GAGATTGCCAAGAACTGGATCATCAACAATCTGCTGGGTGTGTGCATTGCCATCACCGGT
ATGTCCACTCTCAAGCTGTCTACCTTCAAGTCTGGTCTCATCATGCTTGCCGGACTCTTC
TTCTACGACATTTTCTTTGTCTTTGGCACTGATATTATGCTCACGGTTGCCACCTCTATT
GACGGCCCCATCAAGCTAGTGGTCCCCAAGAATGAGTTTGGCAAGGGAGCTCTTCTTGGA
CTCGGTGACATTGTCGTTCCTGGCGTCTACATGAGCTTGTGTCTCCGATACGACGTGTTT
CGATACTACAAGGACGGTAAGGAGCCTTTCCATCTGGCTCGAAAGATCAATGCTCCCTAC
TTTGTGACGTCTTTGATCTTCTACGTGATTGCCCTGATCACCACCATGGTGGTTCTGTTT
GTGTTTGAGCACGGACAGCCCGCACTTCTGTACATTTGCCCTGCTCTGATGATTTCTACT
TTCTTGGTGGGTGTTTACCAGGGGGAGCTGGGTGCTCTGTGGGCCTACGACGGAGAGAAT
GAGCTGGAGGAATAATGTACCATATAAAACAATACCATTAAAACACGATACTGGACGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04818g_CDS-001

Protein length: 585 aa.
Product: Conserved hypothetical protein

>YALI0C04818g_CDS-001 MVYLDIYQTAISLTDAMNNSTVLQGKVAEIASRVLDKIPDHVKTQVADHVTKLTDIGKFY
YDNRNDYTSTVTDHVISYYDKVATCAGTHYAQLGNAVTMWMHDLPFDEQILIFSFLMVAA
VAVVYAGAKAGVCRPFGSRDPDENSELFHICDLQETQTESVGDSEALFMPVFGGLFLCGL
YFAIKYLSKETVQWFLTHYMSFAGSMSVGLVVSMGYKGLLRTVFNSNVAHYKIVLCDDRA
YRGVGSFSRSDIEQMECDKAEKADGEKKNSKSKAKKKSKKDKTVSKGKSNAGGVGKAVEK
SDSVVAVVESAKNTPTKGNKKSKKDKKGETGLNGSQRAGKMSDIDDSFKTESKKSKFNLM
AKYFPIITTDDQLYAIHFTVVDILCFFLSIFCLLSMIKYPEIAKNWIINNLLGVCIAITG
MSTLKLSTFKSGLIMLAGLFFYDIFFVFGTDIMLTVATSIDGPIKLVVPKNEFGKGALLG
LGDIVVPGVYMSLCLRYDVFRYYKDGKEPFHLARKINAPYFVTSLIFYVIALITTMVVLF
VFEHGQPALLYICPALMISTFLVGVYQGELGALWAYDGENELEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG