YALI0C04180g

Overview

Description similar to uniprot|P32383 Saccharomyces cerevisiae YPL268w PLC1 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase
Locus type CDS
Locus tag YALI0C04180g

Location

Species Yarrowia lipolytica Positions 557590..560533
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 2944 (nuc.)
Previous locus YALI0C04158g Next locus YALI0C04213g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04180g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04180gYALI0C04180g_mRNA-001YALI0C04180g_CDS-001

Nucleotide sequence

 

>YALI0C04180g
ATGTCATTGGAACATATAGCACCGCTGGATCTGGAGAACCGGCCCCAGCGGGCAATCGCC
AGATACAAGAGCCTGGAGGCTCTGAGAGGCCGCAAAGACAGCTATCCGCCGCTCCGAAAC
AGTGTGATCCAAGAAACGCAGGACGATTCGGCTCTGGACCTCGAACTGTCGGAACACAGT
GACCCAAACGACACCAACGACCCCAACGACACCAACAACTCCAACGACACAAGCCTGTTC
GCCACAGATCTCTCGCCAGCAGCATCGGCACCCGTGCTGGGAACAGTGCCGCCACTCATT
CCGCCTATCGTCACAAACACAACCCCATTCTCTGTGCCCATCAGTCCTCGTCTGAGCACA
TCCTCCAGTCCTCGGTTTTCGCCTCGGTTTTCGCCCTCCTCGCTCGCAAACACTCTCGCA
TCTTCCCTCAGCATCAGCCCGACTCTCGGATCCACCGTTATGGAACTTCCGACCGCCCTC
GCCCGCAAACTCTCCCGCCGAGGCCTTTCGACAAGCCCCCCTTTCCGAAGCAGAAGCAGC
AGCTGCCCCAGCGTGGAAATGCCAATCACACGACACAAAAACTCGGAGGAACAATCGGCC
GGAAACGTGGCCACAGTATCGTCTATTCTCTCCTCTGAATCAGCAGAGGTCACGGTGCCG
CTCGTTCTACAGCAGGGAATGCCTTTTCTACGTATCACACACAAGAAAAAGGTGCAACGC
ATGTTCAAAATCGACCCTGTTACAGGAAAGGTGTCGTGGGACGACAAGAAGGCCAGTGCA
TGTTTCTCGGTTGACACCATCTGTGAGATTTCGCTGCAGGAAAACGCCCGCAACCACAGA
GAAGAACTCAAAGTCTCGTCCAACCACGAATCACGATGGGTCACCATCACCTACATGAAG
AACAAGCGCCGCAAGCCGCTTCATCTGGTTGCCCCGACCAAGGAGGAGTTTACGTTGTTC
GTTGACGCTCTGCAAAACCTAGTGTATTTTCGCCAGGAGCTGATGCGGGGCTTCCAGTCC
TCGAATCCCAAGATTGCCTCTGTGCACTGGAAGTCGTACGCAGCCAAGGAGCAGGGTGAG
GAGAGACTCACATTCGAAGCCGTTCAGCGTCTCGCTCAACGACATCACGTGCTCTGCTCA
AAGGCATATCTCAAGTCTAAATTTGATGAGGCCGATGTCGACAAGTCCGGCTTTCTGGAG
TTCAACGAGTTCAAGATCTTTGTGAAGCTGCTAAAACGACGCCCAGAGATTGTCACCTTG
TACTACCAGACTCTTGGCAAGCCTGAACCAGCCAACATCTGGAGTGATGATCGTATGACT
CGAGACGATCTGCTTGGGTTCCTTGATCACGTGCAGAGAACCCGGTTTGAGCCCCATATC
TTTGAGAAGATCTGGGCCAAATTCGCCCCCAAAGACGACACATTCGACTCCTCGCTCGAT
TACTGGACAGTTGATTCGTTCAACGATTTCCTTCTGTCTTCCTACAATCTGTTTGTCAAG
CCAGAGACGAATCTCAACCGACCACTCAACGAGTACTACATCTCCACGTCTCACAATACG
TATCTGATTGGTCGTCAGGTTGCAGACACCTCGTCTGAAGAAGGGTACATCCGAGCTCTA
CAATCTGGCTGTCGATCGGTCGAGATTGATATCTGGGACGGACCCGATGACCGTCCGGTA
GTAAAGCACGGCCGAACATTCACCTCATCGGTGTCTGTGGAAGACGTGTGCTCTGCCATT
CGAAAGTACGGGTTCATTGCATCCCCCAACCCTTTGATTCTTTCCTTGGAAATCCACTGC
TCAGCCTCTAATCAGCTCAAGGTAGTCGATATTCTCAAGGGCACTTTTGGCGAGAATCTG
GTCACTCAACCTCTTGTTCCTGGGGCTCTCAATCTCCCGTCGCCTCATGAGCTCAAACAT
CGAGTTCTTATTAAGGTGAAGGCCGGCAGAGAGCCCGTTGCAGGCGATAAAAATAATGGT
GCCTCATTCTCGTCGTCCTACACATCCTCTTCTACTACCACAGCCTCTGAGTTTGACGAC
TTGAGCGGTACTCCTTCCGTTTCAGGCGGAGGAAAAAGAAAGGACACGAGTGGCACGACC
AAGAAGATTGTTCCCGCTCTGGGCGAGCTAGGTGTTTATGTCCAAGGTCTCAAGTTCCGA
AACTTTGCATTCCCGGAATCCAAGACCACTAACCATTGCTTTTCCTTCTCCGAGCGAAAA
TTCATTTCCATCTGCAAGGACCCCGAGAACAGGGAGCAGATGATGAAACACAATCGACGA
TACTTGACGCGAATATACCCCTCGGGCTACCGTGTCAAATCGTCTAACCTCAACCCGCTC
TATTTCTGGCAGAATGGAGCGCAGATGGTGGCTCTTAACTGGCAGACATACGATCTGCCG
GCCCAGCTGAATGACGCCATGTTTGCTGCGCGGGGAGGATATGTGCTAAAGCCACCGTAT
CTTCGTCACCTCAAAAGTCCCCGATCAGGCCATTCTGTGAACTTGTCTTTCATCTCTGCG
CAACAGCTGCCTCGACCAAAGGATCTGGGAAAGTCGTCTTTTGATCCGTACATTGTGGCT
CAGCTGCACGGGCCTGGTGAGAACCACAAGTTGAAGACATCGCCAGTTATTGACAATGGC
TTCAACCCTCGCTGGAACAAGGACTGGAGTCTGTCTTTGAGTCCCGAAGACTACGAGTTT
TCTTTTGTTCAGATCACGCTGTACACTCAGGACCGTCCCTTCGCGGTTTCCTGTCTGAGA
CTGTCGTCGCTCAATGAGGGATATAGACACGTGCCATTGAACGACCTACAGGGGGAGGAG
TATCTGTTCTCTACCTTGTTTATGAAGGTGTCCAAGATCTCCAACTAGAGAGGCCATATG
TCCTCATTGCTTGTATATAGAATGTATTTATTGTCCTTTATTAGCTTAATGTAAGCTATT
GCGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04180g_CDS-001

Protein length: 956 aa.
Product: Phospholipase C, putative

>YALI0C04180g_CDS-001 MSLEHIAPLDLENRPQRAIARYKSLEALRGRKDSYPPLRNSVIQETQDDSALDLELSEHS
DPNDTNDPNDTNNSNDTSLFATDLSPAASAPVLGTVPPLIPPIVTNTTPFSVPISPRLST
SSSPRFSPRFSPSSLANTLASSLSISPTLGSTVMELPTALARKLSRRGLSTSPPFRSRSS
SCPSVEMPITRHKNSEEQSAGNVATVSSILSSESAEVTVPLVLQQGMPFLRITHKKKVQR
MFKIDPVTGKVSWDDKKASACFSVDTICEISLQENARNHREELKVSSNHESRWVTITYMK
NKRRKPLHLVAPTKEEFTLFVDALQNLVYFRQELMRGFQSSNPKIASVHWKSYAAKEQGE
ERLTFEAVQRLAQRHHVLCSKAYLKSKFDEADVDKSGFLEFNEFKIFVKLLKRRPEIVTL
YYQTLGKPEPANIWSDDRMTRDDLLGFLDHVQRTRFEPHIFEKIWAKFAPKDDTFDSSLD
YWTVDSFNDFLLSSYNLFVKPETNLNRPLNEYYISTSHNTYLIGRQVADTSSEEGYIRAL
QSGCRSVEIDIWDGPDDRPVVKHGRTFTSSVSVEDVCSAIRKYGFIASPNPLILSLEIHC
SASNQLKVVDILKGTFGENLVTQPLVPGALNLPSPHELKHRVLIKVKAGREPVAGDKNNG
ASFSSSYTSSSTTTASEFDDLSGTPSVSGGGKRKDTSGTTKKIVPALGELGVYVQGLKFR
NFAFPESKTTNHCFSFSERKFISICKDPENREQMMKHNRRYLTRIYPSGYRVKSSNLNPL
YFWQNGAQMVALNWQTYDLPAQLNDAMFAARGGYVLKPPYLRHLKSPRSGHSVNLSFISA
QQLPRPKDLGKSSFDPYIVAQLHGPGENHKLKTSPVIDNGFNPRWNKDWSLSLSPEDYEF
SFVQITLYTQDRPFAVSCLRLSSLNEGYRHVPLNDLQGEEYLFSTLFMKVSKISN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG