YALI0C03421g - SNF4

Overview

Description uniprot| Yarrowia lipolytica YALI0C03421g SNF4 Nuclear regulatory protein, pseudogene
Locus type CDS
Gene name SNF4
Locus tag YALI0C03421g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 452463..453702
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1240 (nuc.)
Previous locus YALI0C03399g Next locus YALI0C03443g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03421g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03421gYALI0C03421g_mRNA-001YALI0C03421g_CDS-001

Nucleotide sequence

 

>YALI0C03421g
ATGACAGATAGATGCGAAGTGGAAGACGTGCCCAACGACATGCAACCTCGATCACCCGAG
CAGGTTTCCCACCTGTCAGCTTCTCCTGAAGGACGTGACGATTGAGCAGGTGGTCAATGC
TTCCAACAACAACAACAATACTCTAACTCCTCTGGCTGAGTCTTCTGCCGGTGCCACCCA
CACACCACCATCATCCGTGCACATTGTCAACGAGCAGAAGCTGGCAGTGCGTTCGATCCG
ACAATTCCTTCAATCTAAATCTGCATACGATGTTCTCCCTGTGTCGTTCCGGCTCATTGT
GCTGGACACGGCACTGCTGGTGCGAAAGTCGCTGACCATATTGCTGCAAAATAACATTGT
CAGCGCGCCTCTGTGGAACTCCAAGACGTCCAAGTTTGCCGGTCTTCTGACTGCCGCAGA
CTATATCAACGTGATCCAGTACTACTTCCAGAACCCGGACAAGATGGAGGAGATTGACAA
AATCACGCTAGATGACTTCCGTGACGTGGAGAAGGCGGTGGGCGCCAAACCGATCGAAAC
CATTTCGATCCACCCCATGAAGTCCATCTTTGAGGCTTGCAAAAAGATGATTGAGAGCAA
AGCCAAGCGAATCCCACTGATCGATAGAGACGAGGAAACGGGCCGAGAAATTGTCGTTTC
CGTGCTGACCCAGTACCGAATCCTCAAATTTGTGGCGCTCAACTGCAAGGAGACGCGTGG
TCTGATGATGCCTATCTGCTCGCTCCCCAAGCTGGGTGTCTTCAAGGGACTCGCCACGGC
CCACATGGACACCCCCGTGGTCCAGGTCATCAAGCTGCTGGTGGACGCGCGGGTGAGTTC
GATCCCCATCGTCGACACCCACAACCGACTCATGAACGTGTACGAAGCCGTGGACGTGCT
GGCACTGATCAAGGGCGGCATCTACACCGATCTGACACTGTCTGTCGGAGAGGCGCTCAT
GCGACGGCCCGAGGACTTTGAGGGCGTGTACACATGCACTAATCAGGACCGTCTGGATAC
CATTATGAACACGATCCGACGGTCACGGCTGCATCGACTGTATGTGGTTGACGGAGACGG
CAAGTTGGAGGGCGTGGTGACCCTGTCCGACATTCTCAGATACTTGTTGTTTGACGAGGA
TGTCGAGCAGGTGGAGGTTAAGTAGAGCCACAAGTAGCGGCAACGCGACTACTCGTGAAC
GCAGTCATTAGGTAATCATATTCATTTGGAGTAATATTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03421g_CDS-001

Protein length: 388 aa.
Product: Nuclear regulatory protein, pseudogene
Gene: SNF4

>YALI0C03421g_CDS-001 MTDRCEVEDVPNDMQPRSPEQVSHLSASPEDVTIEQVVNASNNNNNTLTPLAESSAGATH
TPPSSVHIVNEQKLAVRSIRQFLQSKSAYDVLPVSFRLIVLDTALLVRKSLTILLQNNIV
SAPLWNSKTSKFAGLLTAADYINVIQYYFQNPDKMEEIDKITLDDFRDVEKAVGAKPIET
ISIHPMKSIFEACKKMIESKAKRIPLIDRDEETGREIVVSVLTQYRILKFVALNCKETRG
LMMPICSLPKLGVFKGLATAHMDTPVVQVIKLLVDARVSSIPIVDTHNRLMNVYEAVDVL
ALIKGGIYTDLTLSVGEALMRRPEDFEGVYTCTNQDRLDTIMNTIRRSRLHRLYVVDGDG
KLEGVVTLSDILRYLLFDEDVEQVEVK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG