YALI0C02387g - YAS1

Overview

Description uniprot|Q6L8K6 Yarrowia lipolytica YALI0C02387g YAS1 Basic helix-loop-helix transcription factor essential for cytochrome p450 induction in response to alkanes
Locus type CDS
Gene name YAS1
Locus tag YALI0C02387g

Location

Species Yarrowia lipolytica Positions 335542..337086
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1545 (nuc.)
Previous locus YALI0C02365g Next locus YALI0C02403r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C02387g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C02387gYALI0C02387g_mRNA-001YALI0C02387g_CDS-001

Nucleotide sequence

 

>YALI0C02387g
ATGGATTCCCGATCAGCCTCCAACTCGGCCACGCCGCCCACCGCCGGGTCGCCCGAGAGC
GCCAAAAAGTCTGCGCGCCGAAAGTCGACGGTGCAGCCCATGCCGCGGGCCCAGAAGCCC
AAGGGCGAGCTGCTGACGGTGGAGGAGAAGAAGGCCAACCACATTGCCAGCGAGCAGAAG
CGCCGTCAGGCGATCCGCGAGGGGTTTGAGCGCATCACCAAGATTGTGCCCAACCTGGAC
AAGAGCCAGGGCCGGTCCGAGGCGATTGTGCTCAATAAGACGGTGGCCTTTTTGAAGAAC
CTCATTGCGGAGGGCAAGGAGCTCGAGCTGCGGTGCAACGAGCTGCAAATTGTCACTCCT
CCGCCGGCGGGCATGTCCAAGGAGAAGGTCAAGAAAGAGGAGTCTCCGGTCTAGAGAGGG
CCGAATCTCAACAACACACCGTGACGGTGGACAAAACAGGACGCCGAGACAGGACGCCGA
GACAGGACGCCGAGACAGGACGCCGAGACAGGACGCCGAAGACATCACGCTGAAAACAGC
ACGCCGAAGACACACCGTCGACTCACAAGACACCGTCGACACAAGCCAGGACAGCGGTAG
CACTCCTCAACTATCAGTTGCCGGTCCCCACACAACACTACACGACCTCACACGACATTA
TGTCTCAGTTGTCAGTTGGGAGGTTGTGGAGTCAACGCAAGACAAAATGGACAGCCCACA
GTTGTCTACTCTACCAACTCAAGACGATTCAAACATCTTGAGACACAACGTATCCCAGCA
AATGTGAGTTGTGTATCAACCCGCAACAAGACAACTGTCACCGGATCACCTACAGAACCA
CAACCCCAACCACCCACAACCACAAAACCACACGACACACCCTCCTACAGCCTACCAGCA
GTCGCCTCTCCCTCCTCCAATGTACAATAAGTATTCTAATCTACTTATGAGTCTGAACGC
CGTCATCCACGACTCGCGGCATCTGTCGAACCCCTGAAACGACGCGATATCGGCCACTCA
CTACCCAAACCCACACTGCGCTTCGGTTCTGCCTCGTCAACCACCTTTTCCTGACCCTGC
TGCTGCCATCGCAGTTCAACAGCAATATGCAACCACCCAGCAGCACGCAGCAACGAAGAG
CTGGGGTATTATGCCATGCAGCAACCCTATCAGCAGGGCAGGCGTTGGGAATGCGAATGT
GAATGCGAATGCGAATGCGAATTGCCGGTCACGTGACCTCAGACCGCCCGGCGACCCGGC
GACCGGCGACCCGACGACCTGGTCTGAACACGCCTAAACGGTGGACCCGTGGCGCCAACT
GTAGCTGCGGCGCTGACTACGACACGGCTATTTCGCCTTGTTTCAGGTGGAAATAGTGTG
TAGGTTCAGTTTACAGCCGCTTCATTTATAGGCTTCATTTATAGGCTTCACTTTGGGGCA
TGTGAAGTGGAGGTTTCAAATAGAGGACGAAACGGAGGGAATATCGGTAATCTGGCAGTT
TCAATGGATTCCGAACGGCCATTCTAATATATTTATGTTTTTTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C02387g_CDS-001

Protein length: 138 aa.
Product: Basic helix-loop-helix transcription factor essential for cytochrome p450 induction in response to alkanes
Gene: YAS1

>YALI0C02387g_CDS-001 MDSRSASNSATPPTAGSPESAKKSARRKSTVQPMPRAQKPKGELLTVEEKKANHIASEQK
RRQAIREGFERITKIVPNLDKSQGRSEAIVLNKTVAFLKNLIAEGKELELRCNELQIVTP
PPAGMSKEKVKKEESPV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG