YALI0C02365g

Overview

Description similar to uniprot|Q8X0V7 Neurospora crassa Conserved hypothetical protein
Locus type CDS
Locus tag YALI0C02365g

Location

Species Yarrowia lipolytica Positions 330060..334085
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 4026 (nuc.)
Previous locus YALI0C02343g Next locus YALI0C02387g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C02365g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C02365gYALI0C02365g_mRNA-001YALI0C02365g_CDS-001

Nucleotide sequence

 

>YALI0C02365g
ATGGCAAAAAAAAACACGCCGACGCCAAAAAAAACGGCCGTGGAGCCCGCATCCAAGGGA
AAGGGCAAGGGCAAAAAGTCTCCGGACCCTGAACCGCTTCCCGGGCCGCCAAAACCCACT
GCCCGCCAGATTGTGGCCAATTCGTCCTGGACCGGAAAATTACCGGCCACTCTGCTCCAC
GAACATGTTCAGAAGTTGAAATGGGAGCGGGTCGACTATGACATGCGACGGGTCAAGACT
GGGTTCATCGCCACCGTGATTCTTAAACAGAAGAACCCCAAGACCCAGGAAGTGGAGGAG
ATCAGATACATGCCTCCTGCGGATCTGGTCCAGGGCAAAGACACGGCCCTGGAAGCCCGC
CATCTAGCTGCCACATACGCGCTGCATCGCATCTCGAGTCACAAAAACCTGTCCATGGTT
CTCCCCACGGATCATAAGACTCTCTGGCAGAAATGTGACAAGAAAAAGAGTGAAGATATC
AAGTCTGGACAGGCCACTGCCGACGACTACGTTCCCGATCCATTTATTGTGAAACGAAAG
CGAGAGACCGAGCGTGCTGACCGCGAAAAGAAGCGCCAGATTGAAAGGGAACGGGCAGAA
AAAAGTAAGGTGGAGGTGAAGGTTGCGATCGAGTCGAGTGGAAAGACGACGGCGAACGGC
GACCCCAAGAAGTCACGTGAGTCACCTGATCCGTCTAGGAAGCCCGGTCCCCGTCCCCGA
GAGCTTTTCCCTCCCAAATCATGGGACTACGCGCCCAAGGCCGAAATGTCTCAGGAGCTG
CGAAACCTGGTGGAAAGCGTCATCAAGAAGAAGGTCACGTGGGAGAAGAATGAAGCCGAT
GATTCGACCACGGCGGCAAATGACAAACTGATTGCCGAAATCACTAACCTGGGATTCCGC
AAGTCCCACGTAACCGAGGCTCTTCAGTACGCTTCTCCGGAGGCTACGGAGCTGCTCGAA
TGGCTTCTACTACATGTTCCTGAGGACGATTTGCCCGGCAAGTTTCTGCCCGACAAGTAC
ACTACGGGAGTGTCGTTCCACACGCTGGAGCTGTCACGTGAGTACATGGTCAAGCGTTTC
CAGGAAGACGGATACAACAGAGATGTGGCCATTGATGTACTGGAGCGAGTTGACTGGAGC
GAGCGGTTGGGTAATGTGGAGTTGTGCAAGAGGTTAATTGGTGAACCTGCCTCCGATTCC
CCGTCTTGTCGGGTCAGTGAGATGACCATCTCCGAGGTATCCGGGGATTCGGAGTCCGAG
TCTCTGTCAATCTGGAACGAGGAAATGGAGGCTCTGGAAGCCATTTTTGAGCCCGAAAGA
CTGTCGGTTGCGGACGACCGAATCAGTGTGTCTCTCAACTGTCGAAATCTCGAAAACGGC
CTGTTACAAGCCACTTTTTGGAGATCCAATGACTACCCGGCATCGTTCCCTTCAATAGCC
GTAAGAGCCATCAAAAAGGGCCACAGATTGCCACATTACATCCAATTGGCCATTATGCGC
CGGGCATTAGAGATGTCACGTGACACGCTGTCTGGGGACGCGCAGATTTGGGCCATTTGC
GAGTGGCTGGAGGACAACTGTTGTGAGATCATAGACAATCCTGGCGAGCTTGCTGGGGTC
AGTGGGGGTGTTGGTATTGTCAATCAGCCCTCTATGGTGGTTAGAAAGGGCCAGAATAAG
TCTCGACCCATTCCCAAGGCTCAACTAAACACCAAACAAATCCAGGAGAGTTTTGTAAAG
CGATTTGTTGGTGGGGAATGGGACAAGATGAAGAAGAGCAGACAGTCGTTGCCGGCATGG
GAAAAGCAGCGGGATGTCATTGATGCTCTTTCTGCCAGTCAGATTGTACTGGTGACCGGA
GAAACCGGTTCCGGTAAGTCCACCCAGACTGTTCAGTTCATTCTGGACCATATGGTGTCC
ACCACCAGCACGACGCCCAACATCATCTGTACACAGCCTCGACGAATTTCCGCCATGGGT
TTGGCTGAACGAGTGGCTGCGGAACGAATGTCTGAACTCGGTACCGAGGTTGGTTACATC
ATCAGAGGCGAAAACAAGACTTCCAAGGAAACACTTTTGCGGTTTGTGACTACTGGAGTG
CTGCTGAAGATGATCCAGGGCGATTTCAAGACTTCTCTGAGCAATGTGACTCACGTGGTG
GTAGATGAGGTCCATGAACGGTCTGTCGATGGTGATGTATTGCTCATCCTTCTCAAGAGT
CTTCTGACAGTGTTCCCGCATCTCAAGATTGTGCTCATGTCTGCCACGGTCGACTCAAAC
ACATTCATCAACTACTTTGGGGGCCACGGCAAGGTCGGTCACGTGCACATTGAGGGCAGA
ACATTCCCAGTCGACGACGTATACCTCGACGGAGTTATTGAACAGAGCAACTACGGAGAA
GGAGAGCCGGTCAACAAAATCATCACCAAACTCGGCGAGGGAGTCAACTACCAGCTGCTG
AGTCATCTCATCAGTCACGTGGACACCCAACTCACGGCGCAGTCATCCAAGGGAGGAGTG
CTCATTTTCCTGCCCGGAGTGGCCGAAATCTCGCAATGTTGCGCGGTGCTGAGTCAGCTG
GGCACCTGTCACGTGATTCCGCTCCACTCCGGGCTCTCGCCTCAGCAGCAGCGGCTGGTT
TTTTCGACTCCGCCCAGGGGCAAGCGCAAGGTTGTTGTTGCCACTAATATTGCCGAGACG
TCGATCACCATTCCGGATATTGTGGCTGTGGTGGACTCTGGGCGTGTCAAGGAGACGGTT
TATGATGCTGAGAACAACATTGTGCGTCTTGTGAGCACGTGGGTATCTCAGGCCGCTGCC
AAGCAGCGTCGTGGACGAGCTGGACGAGTTTCTCGAGGCACCTGCTACAAAATGTACACT
CAGCAGGCGGAGCAGGGCAAAATGCCGGAGCGAACTGTGCCTGAAATGTCTCGGACTCCG
TTGGAGCAGCTGTATTTGTACGTCAAGAGCATGAATGTTGGCGATGTTGGCAAGTTTCTG
TCTCGGGCCATTGATCCTCCTTCTGTGACTGCCATTTCCACCGCCCAGTCCATCCTGACC
AATATGGGGTGTATTTCGGTGTCTGGAGCTCTGACTGCGTTGGGAAAGCACATGTCGATG
ATTCCTGGAGACCTCAAGGTGGCCAAGTTGCTGATTATCGGCTCGGTTCTCGGCTGTTCC
AAGCTCATGTTGGCGGTGGCTGGAGTTCTTTCTGTCAAGTCGCCATTTCTGAGTCTGGCC
GATAAGAGAGACGACATCAAGGCGAGTCGGAGCCAGTTTTCGACCGGAAATGGCGACCTG
TTGACCGATGCCACTGCCTATCTTGAATGGGAGGCCCGCAAACACGTGAAAACCACCCGG
CTGTGGTGCAAGGAGAACTTTCTGTCCTCCGAAGTGCTCTACAACATTGACAGTACCGTC
AAGCAGTTTTCCGAGATTCTGCGCAACCTCAACTACTCCATCAACGGCACCAACACCTCC
AACAACCTGGCCCGAGCCGTCATTGCCTCGTCTCTCAATCAGCAGATTGCCAAGGTGCGC
CATCCGGACAAGAAGTTCTCGCAGCTGGCGTCGGGAGCTGTTCAGGTCGATCCCGAAGCT
CGAGAGTACAAGTATTATCTTCAGAACGAGCGGGTTTTTATCCACCCGTCCTCCACGGCG
TTTTCTGAACGAAATCTGCCCCAGGAGGCCTGCTTCATGGCCTACTTTACCCGCATGGAG
ACCTCCAAGGTGTTTCTGAGAGACGTGACGCCAGTGTCAAAGTACGCCATGCTGCTATTT
GGAGGCAAGCTGGACATTGACTACACCGGGCGAGGCGTGGTGATCAGCGACTGGCTCCAG
ATCACGTGCTGGCCCCGAATCGGAGTGCTGGCGGCCAAATTGAGACAGCTGCTGGAGGAG
GGGCTTCAACGCAAGTTTGACAATCCCCGGGAGGAGCTGGATCCAGAGCTGGTTAACACG
GTGGTCAAGCTTCTGGAGACCGATGGTTTGTAAAAGTGGTATAGATTGTAATGTATTGGT
TGATGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C02365g_CDS-001

Protein length: 1331 aa.
Product: Conserved hypothetical protein

>YALI0C02365g_CDS-001 MAKKNTPTPKKTAVEPASKGKGKGKKSPDPEPLPGPPKPTARQIVANSSWTGKLPATLLH
EHVQKLKWERVDYDMRRVKTGFIATVILKQKNPKTQEVEEIRYMPPADLVQGKDTALEAR
HLAATYALHRISSHKNLSMVLPTDHKTLWQKCDKKKSEDIKSGQATADDYVPDPFIVKRK
RETERADREKKRQIERERAEKSKVEVKVAIESSGKTTANGDPKKSRESPDPSRKPGPRPR
ELFPPKSWDYAPKAEMSQELRNLVESVIKKKVTWEKNEADDSTTAANDKLIAEITNLGFR
KSHVTEALQYASPEATELLEWLLLHVPEDDLPGKFLPDKYTTGVSFHTLELSREYMVKRF
QEDGYNRDVAIDVLERVDWSERLGNVELCKRLIGEPASDSPSCRVSEMTISEVSGDSESE
SLSIWNEEMEALEAIFEPERLSVADDRISVSLNCRNLENGLLQATFWRSNDYPASFPSIA
VRAIKKGHRLPHYIQLAIMRRALEMSRDTLSGDAQIWAICEWLEDNCCEIIDNPGELAGV
SGGVGIVNQPSMVVRKGQNKSRPIPKAQLNTKQIQESFVKRFVGGEWDKMKKSRQSLPAW
EKQRDVIDALSASQIVLVTGETGSGKSTQTVQFILDHMVSTTSTTPNIICTQPRRISAMG
LAERVAAERMSELGTEVGYIIRGENKTSKETLLRFVTTGVLLKMIQGDFKTSLSNVTHVV
VDEVHERSVDGDVLLILLKSLLTVFPHLKIVLMSATVDSNTFINYFGGHGKVGHVHIEGR
TFPVDDVYLDGVIEQSNYGEGEPVNKIITKLGEGVNYQLLSHLISHVDTQLTAQSSKGGV
LIFLPGVAEISQCCAVLSQLGTCHVIPLHSGLSPQQQRLVFSTPPRGKRKVVVATNIAET
SITIPDIVAVVDSGRVKETVYDAENNIVRLVSTWVSQAAAKQRRGRAGRVSRGTCYKMYT
QQAEQGKMPERTVPEMSRTPLEQLYLYVKSMNVGDVGKFLSRAIDPPSVTAISTAQSILT
NMGCISVSGALTALGKHMSMIPGDLKVAKLLIIGSVLGCSKLMLAVAGVLSVKSPFLSLA
DKRDDIKASRSQFSTGNGDLLTDATAYLEWEARKHVKTTRLWCKENFLSSEVLYNIDSTV
KQFSEILRNLNYSINGTNTSNNLARAVIASSLNQQIAKVRHPDKKFSQLASGAVQVDPEA
REYKYYLQNERVFIHPSSTAFSERNLPQEACFMAYFTRMETSKVFLRDVTPVSKYAMLLF
GGKLDIDYTGRGVVISDWLQITCWPRIGVLAAKLRQLLEEGLQRKFDNPREELDPELVNT
VVKLLETDGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG