YALI0C01639g

Overview

Description similar to uniprot|Q06472 Saccharomyces cerevisiae Beta-glucan synthesis-associated protein (Killer toxin- resistance protein 6), pseudogene
Locus type CDS
Locus tag YALI0C01639g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 225606..227729
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 2124 (nuc.)
Previous locus YALI0C01617g Next locus YALI0C01672r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C01639g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C01639gYALI0C01639g_mRNA-001YALI0C01639g_CDS-001

Nucleotide sequence

 

>YALI0C01639g
ATGCGTACCCCGGCGCAGAGCCCTGGCATTCCGCCGGACCTCGGAGGCCCCGAAACTCCA
TACAACAACTCACGCAACATTTCGGAAGGATCAGAATTCAGCTACGGGCCCGGCACGCCG
TATATGCCGCGCACCCGACGCCATTCGGGCGAACAGCGTTCTTTTGGTTCGTCCAGCGAC
TCGCTGAAGAAGGAGAAGATGGGCACGCCGTCGTTTGACAGATACCCCGTGGCAGCGTCG
TTGTCGTCGTATAATATCTCATTCGAGAAACACCCACTCATGGCTGAGGACTCGTTCAGC
CCGTTTGGAGGCTACCCGGTGTCGGTGTTCCCTCTCAACATGGACGAGAAGGAAGGAGAT
GACTACCTGCATAACCCGGACCCGGTGCTGGACCAGGAGATGGACAAAAAGTGCCACCGA
ATGGACTTCCGGGGCGTCAGCTCGCTGATCGCCTTCATCGCACTCATTCTGGGCGCCATT
GCCGTCTTTATTATCGTGCCTGCTCTCACCTACTCTGGAGTCACCGAACGTATCGATCAT
CCTGTCGTCACCCACGATGTCGAGGTATTATCGGCGTACAGATTCCCCCAGCTCAACTTT
AGAAAAACACTCATCGACCCAGATACCCCTTCGTCGGCCACCTCTCACACTGCACGAGAC
GGCTCGTCCTGGAACCTCGTGTTCTCTGACGAATTCAACCTCGAGGGCCGAACATTTTAC
CCCAAGGACGACCCCTTCTGGACCGCTGTGGACCTGCATTACGCCGCCACCCGCGACCTG
GAGTGGTACGACCCCGACGCCGCTATTACTGAGAATGGTACTCTGGTGCTCACTCTTGAT
GCCTTTAAGAACCACGACCTGTACTACCGGTCCGGCATGGTTCAGTCGTGGAACAAGCTG
TGCTTCACTCAGGGCTACATTGAAATCTCGGCGTCTCTCCCCGGCCAAGGAAGAAACCCC
TGGCCTGTGGCCTGGTCTATGGACCATGGGTAACTTGGGACGTCCTGGCTACCTGAGTAC
TACCGACGGAGTCTGGCCTTACTCGTACGACTCGTGTGACGCTGGAATCACCCCCAACCA
GTCCTCCAGCGACGGTATCTCTTACCTTCCTGGCCAGAGACTGAACAAGTGCACTTGCAA
GGGTGAAGACCATCCGAACCCCGGCGTGGGACGAGGAGCTCCCGAGATTGATGCTCTGGA
AGGCTCGGTCGACTCGACTCTTCACGTTGGAGTTGCATCCCAGTCGCTGCAGGTTGCACC
CTTTGATATCTGGTACATTCCCGATTACAACTTTGTGGAGATCCACAACTCCAGTGTCAC
CTCCATGAACACATACGCTGGTGGAATGTTCCAACAGGCCATCTCCGGTATCACCGTGCT
CAACAACGAGTGGTACGAGACCCCATCTGCCGGTTCAAATGACGATAACTCATACTTCCA
GACGTTTGGTTTCGAATACACCAACGACGACAACAATGGATACATCCAGTGGCACGTAGG
TTCCGACCCTACATTCACTCTCCACACCTTTGCCCTTGGACCCAATGGTAACGTCGACCG
ACGACCCATCTCCAAGGAACCCATGTCCATCATCATGAACTTGGGTGTGTCTAATTCGTG
GACCTACATTGACTGGCCCAGTCTCAGCTTCCCATCCAAGATGCGAATCGACTACGTGAG
AATCTACCAGCCTCCGGGACAGCAGAGTATCACTTGTGACCCCAAGGATTACCCTACCTA
TGATTATATTGAGAGGCACCGACCGGCATATGATAATGCCAACTTCACCCTATGGTCTGA
TGCTGGTTATGATCGGCCGTCGAACACATTGATGGACGGTTGTACGTAGAGATCTAAACA
CCTTAGCTCGAGTCTGCGTTTCTGGCGATGGTGTTGAGTTCGTGGAACGGCACAATTAAT
GGAAGTCTTCTCGATCCAGCGGAGCTGGTGAGAGTTGATTAGTAAGCTTGTTTCACGAGC
CCTCGGGTCTCATTGAAACTCCATCGTCCGAGAAACGTATCTCACTATCCAACGTCACGG
ATTAAGCTAGACTTCATCTAGCAACTGGTTCCTTCGGACACCAGTGTTATTTATTTGTAT
GTAACTATAGATTTTTGATTGGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C01639g_CDS-001

Protein length: 632 aa.
Product: Beta-glucan synthesis-associated protein, putative

>YALI0C01639g_CDS-001 MRTPAQSPGIPPDLGGPETPYNNSRNISEGSEFSYGPGTPYMPRTRRHSGEQRSFGSSSD
SLKKEKMGTPSFDRYPVAASLSSYNISFEKHPLMAEDSFSPFGGYPVSVFPLNMDEKEGD
DYLHNPDPVLDQEMDKKCHRMDFRGVSSLIAFIALILGAIAVFIIVPALTYSGVTERIDH
PVVTHDVEVLSAYRFPQLNFRKTLIDPDTPSSATSHTARDGSSWNLVFSDEFNLEGRTFY
PKDDPFWTAVDLHYAATRDLEWYDPDAAITENGTLVLTLDAFKNHDLYYRSGMVQSWNKL
CFTQGYIEISASLPGQGRNPWPVAWSMTMGNLGRPGYLSTTDGVWPYSYDSCDAGITPNQ
SSSDGISYLPGQRLNKCTCKGEDHPNPGVGRGAPEIDALEGSVDSTLHVGVASQSLQVAP
FDIWYIPDYNFVEIHNSSVTSMNTYAGGMFQQAISGITVLNNEWYETPSAGSNDDNSYFQ
TFGFEYTNDDNNGYIQWHVGSDPTFTLHTFALGPNGNVDRRPISKEPMSIIMNLGVSNSW
TYIDWPSLSFPSKMRIDYVRIYQPPGQQSITCDPKDYPTYDYIERHRPAYDNANFTLWSD
AGYDRPSNTLMDGCT*RSKHLSSSLRFWRWC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG