YALI0C01507g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0C01507g

Location

Species Yarrowia lipolytica Positions 210859..212377
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1519 (nuc.)
Previous locus YALI0C01485g Next locus YALI0C01529r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C01507g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C01507gYALI0C01507g_mRNA-001YALI0C01507g_CDS-001

Nucleotide sequence

 

>YALI0C01507g
ATGCGTGAGTATTCACATGTCGCTCGCTACAATAGCCACAACTCCGGTGACACAGGTAGG
AACACCGTCAGAGGGCAGCTTCAGGTAACAGGCGGGATTCATATATACCGGAGCCACAAA
CCCCATCTCACAAGGGGAAAAAAAATACACAAGAAATCAACATCCACTCCGCAGCTTCAG
CTCTACCACAACATGTCGCTATCGCTGCCTCCGGAAATCATCACCATGGTGTGTTATCAC
CTCGACACAAAAAGCCTCCTTGCTCTGGAGGCCAGCTGTTCAGAAATCCGAGCAATAACG
TCGTCGCGGTTTCTCGACGAGGCGCTATTTGCACACAGATGCCGAGACCTGTGCCAGTGG
ATCTCTCCTCAGTATGGCCATGGCTCCTGGAGAGGCACTCTACGACGTCTCAAACGAGTG
GTGACGCCCATGGACTATCACAATTTGCATTTCATGTACGAGCTGGCCGAAGGCGGGCGT
CTTCCCAGCCGTTTCCGCCGAGGAGAACTCGTCAAACGAAGTCATCTCAACACAAAGATG
GAACGGGAGGGCAAGAAAACTGACCAAAACAAACGACTGAGCGTGATAGCGTCAGACGTT
GTTGCCCGCAACTTCCGCTGCAAAATCCTCCACAACCGCATCCAGATGCACCATAACGGA
GTCATCATCACCCTCAACATGTCCGACCAAATTGGAGTTTGTGAGACAGCACGTCCGGAG
TTTTCAATCAAGGACGATGGAGAAAAGGGCTGGAGATACGAGTACGAAACGCGTCTGGGA
CAAGTGGTGCTGCCGTTTGAAGCTTCTTTCATTGCTCAAACAGACGACCATATGACAGTC
AAGGCCATCTCGGGAGACTCCAAAGACAAATTCTTCTTCGTGGACATGACCACGCTGCCT
CATAAACAGCCCATGAAAGTGCCAGCACACACCGCTTTGCACACTGTGGGATCCCTTGCT
CTTCTTACTGATGATTCACACTTACATGTTGTGCACCAAACTGGAGTCTACTCGTTTGGA
GAACAACATGGAAGAAAGAAGTTCACTGTGTGTGGACCCTTCCTCGTGGTATTGTACGAC
AACCTGGTGCTCTCCGTCCTCTACCAAGATGACTCTTCCGTTTATTTGGTGGGCCATGTC
GTACTCCAAGGATGGAACTTTGAAACTGCTAGACTGGTAGCAGACGTCACCCTGCATAAA
TTCGTCATGCTGTGCTCAGATAATTGCACGCTGCTGATGGATCTAGAAACCCTAGAGATG
GACACCTTGCCTCCATCCCAAATCAACAGTATTGATTCGGAACTCAACGCATGGGCTTAC
TCCGAGCGGTATCTCAAGGTCATAGCCTACAAGGCTGCATGTATCAAGAAGGCCACCGAG
GAGAGAATAGGACGAGTGATTGAGGAGCCGTTTGTATTCGACTTTCGCTACGTGAACAAT
GTAGCCGAGGAAGGGTTGATTCAGATGAGCACCCATTCAACTATCGTTTAAGCATTATAG
AAATAAAGTGTAACTGATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C01507g_CDS-001

Protein length: 497 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C01507g_CDS-001 MREYSHVARYNSHNSGDTGRNTVRGQLQVTGGIHIYRSHKPHLTRGKKIHKKSTSTPQLQ
LYHNMSLSLPPEIITMVCYHLDTKSLLALEASCSEIRAITSSRFLDEALFAHRCRDLCQW
ISPQYGHGSWRGTLRRLKRVVTPMDYHNLHFMYELAEGGRLPSRFRRGELVKRSHLNTKM
EREGKKTDQNKRLSVIASDVVARNFRCKILHNRIQMHHNGVIITLNMSDQIGVCETARPE
FSIKDDGEKGWRYEYETRLGQVVLPFEASFIAQTDDHMTVKAISGDSKDKFFFVDMTTLP
HKQPMKVPAHTALHTVGSLALLTDDSHLHVVHQTGVYSFGEQHGRKKFTVCGPFLVVLYD
NLVLSVLYQDDSSVYLVGHVVLQGWNFETARLVADVTLHKFVMLCSDNCTLLMDLETLEM
DTLPPSQINSIDSELNAWAYSERYLKVIAYKAACIKKATEERIGRVIEEPFVFDFRYVNN
VAEEGLIQMSTHSTIV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG