YALI0C01485g

Overview

Description similar to uniprot|Q04174 Saccharomyces cerevisiae YOR149C SMP3 Alpha 1,2-mannosyltransferase involved in glycosyl phosphatidyl inositol (GPI) biosynthesis
Locus type CDS
Locus tag YALI0C01485g

Location

Species Yarrowia lipolytica Positions 209224..210845
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1622 (nuc.)
Previous locus YALI0C01463g Next locus YALI0C01507g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C01485g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C01485gYALI0C01485g_mRNA-001YALI0C01485g_CDS-001

Nucleotide sequence

 

>YALI0C01485g
ATGATCTGGAACAACCGTCTGATTTTGGCGTTGTCGCTGCTGCTGCGCCTGCATCTCGCC
ATCTCGCCGTCTTACATCCACCCCGATGAGCACTTTCAGGGCCCGGAGTACGCGCTGGGC
AACCTGTTTGACTGGGCCCATGAAACCACCTGGGAGTTCAGGGGCGACAGTCCCATTCGC
AGCTTTGTGCCGCTATGGATCCTGTATACTGCTCCCCTGAGCGTGTTGAATTTCCTGTGG
AAGGGTCAGTTGTCGCCTCGAGAAGCTTACTGGTTCATCCGAGCCGGCCACGCGCTGGCA
TACTGGATTCTGGGAGACATGGCTCTGGACCGATTGAGCGACAGCAAAAAGAGCAAGACC
AAGACGCTGTATCTCGTGGGATGCTCCTACGTCACGTGGTCATACCAGAGCCATACCTTC
TCCAACTCCACAGAGACACTGCTGGTACTGTGGTGTCTTGTGATCATCAAAGAGAGCCAG
CAACGGCACTCAATGCACCATCAACGTGTCCACAAGTTTATGGATGCTGGTTTGCTCGGT
CTGCTTATTGTCATTGGAACCTGGAACCGAGTTACTTTCCCTCTATGGCTCATTGTTCCT
GGACTGACCTACCTACGGAAGTACCTCATTCATAACATTTCGTCGCTCATACTGCTTATT
GCCAGTGTAGCTCTCACGGCCTTCTTTGTCATCCATGTTGATTCAGTTCATTATGACCTT
GAATGGACCATCACTCCCCTCAACTCCTTCCTGTACAATTCTCAAGGACACAATCTGGCT
GAGCACGGCATTCACAACAGACTCACACACCTCGTGAGCAACCTCCCTGTGCTTCTGGGT
CCTCTTCTTATTCTTCTGAGAACCCCTTCTCAATACTGGAAGTCTCTGCAGTTCCAGAGC
GCCATCAGTGGTGTCTTCTTCCTGTCCTTGTTTCCCCACCAGGAGGCTAGATTCCTCATG
CCGGCAGTTCCGCTCCTGATTTCCTGCTACGACATCAATGCTGTGCCAAGAAGATTTACC
TCGGCTATATTCCTCCTGTCGTACGTGTTCAACATCATCATGGGCTTCCTTATGGGTACT
CTTCATCAAGGAGGAGTGGTTCCAGCCCAACACTACCTGTCCAAACACGTTGACAGCGGC
TCGCACACAGTGGTCTACTGGAGAACATACAAACCTCCCTCGTGGCTGTTAGGTATTCCA
GAGGGTGAGCTTGAGATTCTCGATAAAGACCATCCTCTAGGAACAAACCTGTTCAAAAGA
GTCACGGATGAGATCGAAAACATCCAAATCAGACACAAAAAGACCATGGTGACGGTTCTG
GATCTCATGGGATCTTCTCCAGAGTATGTCAATGATGTCATTGCAGCTCTGGCACCGATT
AACCCCCTCCTTGTTGCACCAGTAGCTGGTCTGAAGGAGCTAGACCTTCCCGCGTACAAG
GAGGTGTGGAAGACCCGATTCCATCTTGGATTGGACCACATTGATGGGTTGGAGAGCCTG
GAACCGGGTCTAGTGGTCTTGGAAGTGCTATAATCCGGCCCAGCCTTATATTTATTGGAA
TCAGGAAACATAATTGTACATAATTAATTCGTAAGTTTAACAGAAAGAGATTAACTAATT
TA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C01485g_CDS-001

Protein length: 511 aa.
Product: Alpha 1,2-mannosyltransferase, putative

>YALI0C01485g_CDS-001 MIWNNRLILALSLLLRLHLAISPSYIHPDEHFQGPEYALGNLFDWAHETTWEFRGDSPIR
SFVPLWILYTAPLSVLNFLWKGQLSPREAYWFIRAGHALAYWILGDMALDRLSDSKKSKT
KTLYLVGCSYVTWSYQSHTFSNSTETLLVLWCLVIIKESQQRHSMHHQRVHKFMDAGLLG
LLIVIGTWNRVTFPLWLIVPGLTYLRKYLIHNISSLILLIASVALTAFFVIHVDSVHYDL
EWTITPLNSFLYNSQGHNLAEHGIHNRLTHLVSNLPVLLGPLLILLRTPSQYWKSLQFQS
AISGVFFLSLFPHQEARFLMPAVPLLISCYDINAVPRRFTSAIFLLSYVFNIIMGFLMGT
LHQGGVVPAQHYLSKHVDSGSHTVVYWRTYKPPSWLLGIPEGELEILDKDHPLGTNLFKR
VTDEIENIQIRHKKTMVTVLDLMGSSPEYVNDVIAALAPINPLLVAPVAGLKELDLPAYK
EVWKTRFHLGLDHIDGLESLEPGLVVLEVL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG