YALI0C01397g

Overview

Description weakly similar to uniprot|C4R052 Komagataella pastoris Mitochondrial outer membrane protein with similarity to Tom70p
Locus type CDS
Locus tag YALI0C01397g

Location

Species Yarrowia lipolytica Positions 188210..189252
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1043 (nuc.)
Previous locus YALI0C01375g Next locus YALI0C01411g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C01397g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C01397gYALI0C01397g_mRNA-001YALI0C01397g_CDS-001

Nucleotide sequence

 

>YALI0C01397g
ATGTCAGAAGAGTTCAAAGAAAAGGGTGAGTACCACAATCGAGAGCTCTTACCATCCCCT
ATCTAACTAACACAGGCAACGCGCTCTTCAAAGCCCAGGACTACGCACAAGCAGCCCAGA
AATACTCTCTCGCCATTGACGCCCTCCCCCACCCCGTCTACTACTCCAACAGAGCGGCAT
GCTACCTCAAACTAGGAGAGTACGACAAGGCCGCCGCGGATTGCAAGGCCGGTCTCGATC
ACGTGCCCGAGTTCCAGAAACCACAACCCAACGTCCCCGAGCTGAAACCCGACACTCCCA
TCAAGCTCTTCTTCCGATGGTCTCAGGCTCTGGAAGACCAACGCAACTACGCAGCCGCGA
TCTACGTGTGCAACTCGGGTCTCAAGACATACCCGGGTAACGAATCGCTCACGACACAGC
TCAAGAAATTGCAATGGGTAGAGAAGAAGGAGAAACGAGACATGAAACAAAAGGCCTTTG
CTCCCCAGCCACAGACGCAAGCAATCCCCACCCCAGAAGCCTCTCCAACAACCCAATATA
TTCCAATCCAGGTGGTCGACTCGCTGCCTATCGATCTAATGTCGATATATAACACTCCCG
AAACTACAGACCTGCTGGAGTCTCCAAAACTATCCACTGCAGCACCCACACACCATGCAT
TCCCTACCCAGCTGCCTCTCATGCTTCCAGCCTGCCTGAACGCTTACACACTTGCCCAGC
TGCTCAAATCCCCCCAGAACCAAATGAAGGAAGTCCGAACATACTTGTACAACTACGATG
TGGCCCAATGGCCCCATATCTTTGGAAGAGGAGGAATCGACGCGGACTTCATCGAAGAGA
TGCTCAAGGCTATCATTGAGAACGAGGACAATTCACAACGACCAAGGGATATTGTACAGA
GTATGAAGAAATGCGAACGATTCAATATCGCAAACACATTTGTGCCCAAGGACCTCAAGA
CCAAGGTTAACGAGATATGTGGTGAATCTCTGTGAATATAACTAATAATAACAAACATAC
ATAATAATGCCATATATTAGCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C01397g_CDS-001

Protein length: 315 aa.
Product: Conserved hypothetical protein

>YALI0C01397g_CDS-001 MSEEFKEKGNALFKAQDYAQAAQKYSLAIDALPHPVYYSNRAACYLKLGEYDKAAADCKA
GLDHVPEFQKPQPNVPELKPDTPIKLFFRWSQALEDQRNYAAAIYVCNSGLKTYPGNESL
TTQLKKLQWVEKKEKRDMKQKAFAPQPQTQAIPTPEASPTTQYIPIQVVDSLPIDLMSIY
NTPETTDLLESPKLSTAAPTHHAFPTQLPLMLPACLNAYTLAQLLKSPQNQMKEVRTYLY
NYDVAQWPHIFGRGGIDADFIEEMLKAIIENEDNSQRPRDIVQSMKKCERFNIANTFVPK
DLKTKVNEICGESL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG