YALI0C01411g

Overview

Description similar to uniprot|Q6C549 Yarrowia lipolytica YALI0E21021g FKS1 component of 1,3-beta-glucan synthase
Locus type CDS
Locus tag YALI0C01411g

Location

Species Yarrowia lipolytica Positions 189229..195423
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 6195 (nuc.)
Previous locus YALI0C01397g Next locus YALI0C01415r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C01411g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C01411gYALI0C01411g_mRNA-001YALI0C01411g_CDS-001

Nucleotide sequence

 

>YALI0C01411g
ATGGGACAATTTTTCCAAGTGAGTTCACTCGGCCGGCCGGTCTAATTTTATCAATCTCCA
ATCTCGACATCGCACAGCATCCATTTCTCAACCACAGCTCTAGTTAACTACAGTACAATT
ATTTTCTGTCTTTTCTTCCACTAATTTTTATAAGGTTACTGAAGCAACGCGATCAATCAC
AGTTTGTGTTGTGTTGTGACCACCCTATCATATCTTCTCCACCTAATCTTCTGCAACTTT
TACACACACCTTTGCCTCGACACTCGCCACCCTAGATACCCTCTGAGAGATACTATCGGA
TATTCCCTGGACTAGAGCTTCTACCAAGAGATACCAAGGTATGTGGACCGGCGCCCATGT
TGCGATACCACCGCTCTATTCATTGTGATACCTCCAGCCATTATCATACTAACACAGATG
CCTCGAAGGGCTACCATGCGGTCAGTGTACTCGGAGAGCACGCACAGCATGGCGTCCTAC
GATAACCGCAGCTCGGACTTTTCCGAAGACTACACCACAGAGGGCCACATTACTGAAAAT
GCCGCCACAGATGGCCACTACACCACCACCGACGACGACTCGTACGACTCGTACTACGAC
GGCGGCGACAATGCCTCCACCATGCGCATGGCACCAGACACCTCTTCACTGGCGGCAGTC
AACTCTTCCGTAGACTGGATCCGTGAAAAGGACGAAGCCATCGTCAACCCCGGAGTGGCT
CCCGATCTCCAGGGAGACGGAAACCTGCACAGCATCCCTCCGGACCACCAAAAATACGAA
CATGGAGCCCCCGCCTTCACCACGGGCAAGATGTCTGCGCCATACAACCAGAAGTCTGCT
CCATACGACGGCCAGGAAATGTCTGGATTCGTGTCTCCGCAGGTGCGATACCGAATGGCA
CTGTTTCCAGAGGAGATTGGCTCTGGAAATGTCCCGCTTGAGTACACGGACGAGCACCAG
AAACACCTGTTCGAGACGTACTTTGACTGGGTACCACACCCCCAGATTGTCATCCCCATC
AATCTCTACGAGGTTGTGGAGGTGTTCGATCTGCTCCAGTCCAAGTTTGGCTTCCAGGTG
CAGAGCATGCGAAACATGCGTGACCACTTCATGTGTCTTCTGGACTCCCGGTCCTCTCGA
ATGTCTTACAACGATGCTCTGCTCACCCTCCACGCGGACTATATTGGAGGAGAACATTCC
AACTACCGGAAGTGGTACTTTGCTTCCCAGATGGACATCACAGACAAGATTGGAGGAATA
AATGTCGATTACTCCGGCAAGTTGACCAAAGCCGGACGTCGCATGGTCGCTACCGATACC
GTTTGGAACGAAGAAAACGCAAACTTCTCCTACGAGCACAGCAATCGGAACTGGAAGAAC
CATATGGCGACTATAAGCCCCAAGGACCAGCTGAAGGACATTGCTCTGTATCTGCTCATT
TGGGGTGAGGCAAACCAGGTTCGATTTATGCCTGAATGTCTCTGTTTCCTGTACAATTGT
GCACGGGACTTTTGTTACTCCACCGCCTTCGCTACTGCCCCTGACGTGGAGGATGGTGTC
TTTTTAGACACTATCATCACACCCCTCTATTCTTTCTACAGAAACCAGAGGTACGAGAAT
TTCGAGGGCAAGTTTATCGATCGTGAGCGCGATCACAAGGACGTGATTGGTTACGACGAT
ATCAACCAGCTGTTTTGGTACCGCCAGGGTCTCTTACGCATCAAGCTGAAGGGCGGAACT
AACCGCATTTTAGACTTGCCGGCTTCAGAGAGATACAATGCGTTGTCCACCGTGGATTGG
ACCACGTGCTTCTACAAGACTTACCATGAGTCTCGGTCTTGGATGCACCTGGCAGTCAAT
TTCCACAGAATCTGGATCATCCACTTCTGTGTCTTCTGGTTCTACACGGCCTTCAATACG
CCGTCACTCTACACAGAGAACTACTCCCAGGAGCTGGACAATTTGCCCCCAGCTCACGTG
AGAATCTCGGTGGTCGGATTGGGAGGAGTTATGGCACCATTGATCTGCCTGGTAGCTGTT
ATGGGTGAGGCCGTTTTTGTGCCGATGAGATGGCCTGGACGTGAAAGAGTTGCATATCGG
CTCTTCTGCCTGCTACTCGTGACAAGCCTCAACGCTGCACCCGCTGTGTTTGTGCTGTTA
TGGTACTCACGAACAGAAGAGAATGGCCAGGCCCTGATGATATCCATCATTCAGCTGGTC
ATTGCCTTCGTGACAGTGCTCTACTTTGCCTTCACGCCGCTCAAAAGCTTGTTTACCTTC
TTCCCTAAAGACAAGTTCAATCGTCGACAGCTTCCTACGAAATTCTTTGCCTCGTCATTT
CCTCCTTTAAAGGGTAATGATAGATGGATGTCGTATGGCCTGTGGGTGTGTGTATTTGTC
GCCAAGTACATTGAGTCTTACTTCTTCATGATTCTCTCTCTCAAGGACCCCACACGAGAG
CTGGGATTGGTTGAGTATGACAAGTGTGTGGGTGCTGAGTACGTCGGAAAGATCCTGTGC
AAGTACCAGCCCCTATTTGTGCTTGCATGCATGTTTGTCACAGAACTGGTTCTGTTTTTC
CTCGATACCTATCTCTGGTACATTATCTTCAACACAACATTCTCTGTGATCCGGTCTGTG
TATCTTGGAGGCACCCTTTGGACTCCTTGGCGCAACACGTTTTCGAGACTGCCGAAACGA
ATCTACTCCAAAATCCTTTCCACCTCTCATCTGCCCTCCAACAGATACAAAAAGAGCTAT
CTGGTGTCTCAAGTCTGGAATTCTATAATAACTTCATTGTATCGCGAGCACATCATCTCT
CAAGAGCATGCTCACAGGCTCGCGTATCAGCAGGAGATTGATGGACAGGGCATGTGTGTG
TTATCAGAGCCCAAGTACTTCGCATCTCAGGAGGATCAGTCGTTCCACAACTCTGTGTTT
GATTCTCAGACCGAAGGCGAACGTCGTCTTTCATTCTTTGCACAGTCCCTGGCCACTCCT
ATCCCAGACAATTATGTCATTGATGAGATGCCTACGTTCACCGTCCTTGTTCCTCACTAC
AACGAGAAGATTCTGCTGTCGCTGAAGGAGATCATCAAGGAGGATGGCGAGAACTCACGA
GTAACACTGTTGGAGTACCTCAAGCAGCTTCATGCCAATGAGTGGGATAACTTTGTGTGT
GATTCCAAGCTGATGCACGACTTCATGCACAACAACGGCGGCGAAGAGGTTCAGGGCAGC
TACCAGGAGAAGAAGGATGGTGGGGAGGATGGTCTTCTCAATGTGCCGGAGGTAATTCAC
AAGCGGGACCAAAAGAGTGGCAAGTACGACAATCTGCCATACTATTGTGTCGGTTTCAAG
TTTTCGTCTCCTGAGAACCAGATGAGAACTCGAATTTGGGCCTCGCTGAGATGCCAGACC
CTCTACCGTACCGTTTGTGGTTTCATGAACTACTCCAGGGCCATCAAACTGCTCTACAAC
GTGGAGAACCCCGAGCTGCTCCACCACTGCCAGAACGACACCCGAGTCTTCAACCAGCAT
CTTGACATGATATCCCGTCGTAAGTTCAGATTGCTTGTTTCTATGCAGAGATTGAGCAAG
TTTGATGTGCAGGAGACTGAAAATCTGGAGTACCTGCTCAAGATGCACCCCGAGCTGCAG
GTGGCTTATCTGGACGAGGACCCCAGCCAAGGTGGACGAGAACCGATCGTGTATGCCTCT
CTCATTGACGGTGACAGCGACATTCTTGACAACGGCAGACGGAAGCCTCGGTACCGAATT
CGGCTGTCTGGAAATCCCATTCTCGGAGACGGAAAGAGTGATAACCAGAATGTGGCTCTC
ATTTTTCATCGAGGAGAGTACATTCAGCTCGTGGACGCCAACCAGGACAGCTACATTGAG
GAGTGTCTGAAGATTCGGAGCATTCTGGCTGAATTTGAGGAGTTTCCAGCTGGAAATGTG
CCTGCTTCTCCGTACGCCAGTCCCAAGGCCAACGAAAAGAACCCCGACACTCTTGCCAAC
CCTGTGGCCTTCATTGGTTCTCGCGAGTACATCTTCTCCGAGAACATTGGTGTGCTTGGA
GACATTGCTGCAGGAAAGGAACAGACTTTTGGTACTCTCTTTGCGCGTACACTGTCCAAG
ATCGGTGGAAAACTGCACTACGGTCATCCAGATTACCTCAATGCCACATTCATGGTGACC
CGAGGTGGTGTTTCCAAAGCGCAAAAAGGATTGCACCTGAACGAGGACATCTATGCTGGT
ATGAACGCGCTCATGAGAGGTGGTCGAATTAAGCACTCAGAGTACGTCCAATGCGGTAAG
GGTCGTGATCTTGGGTTCGGATCTATTCTCAATTTTTCCACAAAGATTGGCGCTGGTATG
GGAGAGCAGATGCTGAGTCGGGAATACTACTACCTCGGCACTCACCTCCCTCTGGACCGC
TTCTTGTCGTTCTATTACGCCCACCCAGGGTTCCATATCAACAACATGTTCATCATCATG
TCTGTCGAGTTTTTCCTCATTGTTGGAATCAACATTGCTGCTCTCTACAGCTCCTCAGTT
ATATGTGAGTACGACAGATCTGCACCCATTACTGCTGCTCGTGTTCCAGAGGGCTGCACC
AACGTGATCCCTATTATTGAGTGGCTGGAGCGGTGCATTTTGTCCATCTTTGTCGTCTTC
TTCATGTCCTTTGTGCCACTTTTCATTCAGGAGTTCAGCGAGAGAGGTTTCTTGAGAGCT
GCCACAAGACTTGCCAAGCATCTGGCTTGTCTGTCGCCACTGTTTGAGGTCTTTTGTTGT
CAGATCTACGCCAAGGCGCTCTTACAAGATTTGACGATTGGTGGCGCTCGGTACATCTCC
ACTGGACGAGGATTTGCAACATCTCGGATACCGTTCGTAACTTTATATTCGCGATTTGCA
ACTGCCTCTATCTACTTTGGTGCGATATCACTGCTCATCATGATTGTGATTAGTACCACC
ATGTGGAGAGTGGCTCTGCTATGGTTTTGGGTGACAGCTGTGGCCCTTTGCATCTCTCCC
TTCTTGTTCAATCCCCACCAGTTTGCGTGGGTTGACTACTTTGTGGACTATCGAAACTTC
ATTCGGTGGCTGAATCGAGGCAACACAAAGTGGCACAAGTCGTCTTGGATTGGGTACACT
CGTCTGATTCGAACCAGGATCACTGGCTACAAGAAGAAAACGCTCAACGAGATTTCCGAG
ACTGACAGTCGGGGAGTGATGAAGCCCAGTCTGGTGAATGTCTTCCTGTCCGAGGTTGTT
GGCACTCTTCTCTCGGCGTGCTGCATTACTCTCCCCTACCTGTTCATGAACTACCAAAAT
GAGCAAATCGACGGGACACCTAGCAACCCTCTTATGCGACTGGCAATCTGCACCTTGTTC
CCTATCGTTATGAACATTGTGATGGAGCTGGTGCTATTTGGAGTGTCTTGTCTTGTGGGG
CCCATTTTCTCTGTCTGTTGTAAGTCAGCACCTGGCACCTTTGCCGCAGTCGTCCACACC
TTTGCTGTACTGAACCATCTGGTTGCGTTTGAACTCATGTGGTTCTTCCAGCGTTGGAAT
GTTCCCGTGACACTTCTTGGTTTCATTTCATGCACTTTGATTCAAGACTTCATATTCAAG
ACCATAATTACGTTGTTCCTGAGTCGAGAATTGAAGCACGACCACACAAACCGTGCCTGG
TGGTCTGGCAAGTGGTTCACCGCTGGGTTAGGATGGAGGATCCTCACCCAGCCTTGGAGA
GAGATGCTGTGCAAGAAGATCGAAAGCAGCATGTATGCTCTGGATTACATTCTTGGACAT
GCGCTGTTTTTCGTTCAGTTCCCACTCATTTTGATTCCTTTTGTTGATCGGTGGCACTCC
ATGATGCTATTCTGGCTGCGGCCCAGCAGGCAGATTCGGTCACCCGTCTTCTCGACCCGA
CAGAAGCGAGTTCGAAGACGCATTGTGACCCGATACGCAATTCTATTTGCGCTGAACCTG
CTCGCGATGACGGCCCTGTTTGTGTTACCCATTGTGTTCAAAGATACCCTTGATATCGAG
CTGGATAACCATGTGCCTTGGTTTCTTCGGGGCTTGCAGCAGCCGTTACCTAACGCTCGG
CTGCCACTTGGGAAGCTGCCGGAGAAGAAGATTGATGTTTAGAGATTGCTTTAGCTAATA
TATGGCATTATTATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C01411g_CDS-001

Protein length: 1921 aa.
Product: Glycosyltransferase, putative

>YALI0C01411g_CDS-001 MGQFFQMPRRATMRSVYSESTHSMASYDNRSSDFSEDYTTEGHITENAATDGHYTTTDDD
SYDSYYDGGDNASTMRMAPDTSSLAAVNSSVDWIREKDEAIVNPGVAPDLQGDGNLHSIP
PDHQKYEHGAPAFTTGKMSAPYNQKSAPYDGQEMSGFVSPQVRYRMALFPEEIGSGNVPL
EYTDEHQKHLFETYFDWVPHPQIVIPINLYEVVEVFDLLQSKFGFQVQSMRNMRDHFMCL
LDSRSSRMSYNDALLTLHADYIGGEHSNYRKWYFASQMDITDKIGGINVDYSGKLTKAGR
RMVATDTVWNEENANFSYEHSNRNWKNHMATISPKDQLKDIALYLLIWGEANQVRFMPEC
LCFLYNCARDFCYSTAFATAPDVEDGVFLDTIITPLYSFYRNQRYENFEGKFIDRERDHK
DVIGYDDINQLFWYRQGLLRIKLKGGTNRILDLPASERYNALSTVDWTTCFYKTYHESRS
WMHLAVNFHRIWIIHFCVFWFYTAFNTPSLYTENYSQELDNLPPAHVRISVVGLGGVMAP
LICLVAVMGEAVFVPMRWPGRERVAYRLFCLLLVTSLNAAPAVFVLLWYSRTEENGQALM
ISIIQLVIAFVTVLYFAFTPLKSLFTFFPKDKFNRRQLPTKFFASSFPPLKGNDRWMSYG
LWVCVFVAKYIESYFFMILSLKDPTRELGLVEYDKCVGAEYVGKILCKYQPLFVLACMFV
TELVLFFLDTYLWYIIFNTTFSVIRSVYLGGTLWTPWRNTFSRLPKRIYSKILSTSHLPS
NRYKKSYLVSQVWNSIITSLYREHIISQEHAHRLAYQQEIDGQGMCVLSEPKYFASQEDQ
SFHNSVFDSQTEGERRLSFFAQSLATPIPDNYVIDEMPTFTVLVPHYNEKILLSLKEIIK
EDGENSRVTLLEYLKQLHANEWDNFVCDSKLMHDFMHNNGGEEVQGSYQEKKDGGEDGLL
NVPEVIHKRDQKSGKYDNLPYYCVGFKFSSPENQMRTRIWASLRCQTLYRTVCGFMNYSR
AIKLLYNVENPELLHHCQNDTRVFNQHLDMISRRKFRLLVSMQRLSKFDVQETENLEYLL
KMHPELQVAYLDEDPSQGGREPIVYASLIDGDSDILDNGRRKPRYRIRLSGNPILGDGKS
DNQNVALIFHRGEYIQLVDANQDSYIEECLKIRSILAEFEEFPAGNVPASPYASPKANEK
NPDTLANPVAFIGSREYIFSENIGVLGDIAAGKEQTFGTLFARTLSKIGGKLHYGHPDYL
NATFMVTRGGVSKAQKGLHLNEDIYAGMNALMRGGRIKHSEYVQCGKGRDLGFGSILNFS
TKIGAGMGEQMLSREYYYLGTHLPLDRFLSFYYAHPGFHINNMFIIMSVEFFLIVGINIA
ALYSSSVICEYDRSAPITAARVPEGCTNVIPIIEWLERCILSIFVVFFMSFVPLFIQEFS
ERGFLRAATRLAKHLACLSPLFEVFCCQIYAKALLQDLTIGGARYISTGRGFATSRIPFV
TLYSRFATASIYFGAISLLIMIVISTTMWRVALLWFWVTAVALCISPFLFNPHQFAWVDY
FVDYRNFIRWLNRGNTKWHKSSWIGYTRLIRTRITGYKKKTLNEISETDSRGVMKPSLVN
VFLSEVVGTLLSACCITLPYLFMNYQNEQIDGTPSNPLMRLAICTLFPIVMNIVMELVLF
GVSCLVGPIFSVCCKSAPGTFAAVVHTFAVLNHLVAFELMWFFQRWNVPVTLLGFISCTL
IQDFIFKTIITLFLSRELKHDHTNRAWWSGKWFTAGLGWRILTQPWREMLCKKIESSMYA
LDYILGHALFFVQFPLILIPFVDRWHSMMLFWLRPSRQIRSPVFSTRQKRVRRRIVTRYA
ILFALNLLAMTALFVLPIVFKDTLDIELDNHVPWFLRGLQQPLPNARLPLGKLPEKKIDV
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG