YALI0C01375g

Overview

Description weakly similar to uniprot|Q05854 Saccharomyces cerevisiae YLR278C Zinc-cluster protein
Locus type CDS
Locus tag YALI0C01375g

Location

Species Yarrowia lipolytica Positions 185400..187832
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 2433 (nuc.)
Previous locus YALI0C01353t Next locus YALI0C01397g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C01375g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C01375gYALI0C01375g_mRNA-001YALI0C01375g_CDS-001

Nucleotide sequence

 

>YALI0C01375g
ATGAAAAGGTCGATATCCCCTTCCGGCCCCGGAGCCAAAAAATCAAGAACCACGTCGTGC
GAACGATGCCAGAGACGAAAACAGAAATGCGACCACATGCTACCAACGTGCACAAACTGC
CTCAAGGCCGGCGTCACCTGTGTGCAGCCCGAAAAGTACGCCACCAAGGCCCCCGAGAAG
GACGACTACGTGCTGCATCTGGAGAAGAAGGTGGCCATGCTGGAGGACCTGATAGCTCGA
CAACAAGGCCAGTCGCGAGTGTCAGACGCCTGTAACGGCGTCAAGGAGTCCCAGGCACAT
CACCACCACCACTCCCATGGGTCGCTGGGTCATAACCATATTCTTTCGCCGGGTATTCCT
CTTCCTCTACAACAACAGGGAGGGCCGACATCGTCACCAAACGCTCCCCCTACTCCCTCG
GAACCACCCAACCGAACAGTTTCAATTCTCAACGTCGATCCCAACAGTAACTCGACAGCG
CCACAGTCGTTTTCGGTGGTTTCACAGCGGCTTCAGGACTCGTTATGGGACAGCCATCTG
GCGACAGAAACGAACGTGCCCGTGGATCCTTCTTCCGAAGGATTCCTTATTCCGCCACAG
TTTGACTTCTCGCCATACAAAGGAGACCCTGTGGAGCAACCCAGCAGTGAACTGGCCGAC
AAGCTTCTCGAGACGTTCTTCCTCAAAGTCCATACTCGTCTACCCATGGTTCCCCGACAT
GAGTACCAGCAAATGTACAGACTGCGATTTGACAAACCTGTGGGTGCATTCAACTCGGCT
GCATACACAGCATACCGTGTCCGGTGTTTTCGACTGTATATTGCCTATGCTGCTGCTGCC
ATGATTCTCGATATGGCCGACCAGTATGAAGGGCCTGACTACATGGGCTACTTTTACATG
GCCATGAGATACGGTCAATGCGCCAAGGTGGACGATCCGTGTCTGCAGATTGAGGCCTGT
CTGTTCGCCATTCATGTGCTGGTACGATGTGATAACGAGGTTGAGTTGTACAAGAAGTTT
CTCGACATTGCAACCTTGCTGTCGTCACAGGCGTTGCTGCACAAGAAGGAGACATACGAG
GGGCTGTCTCGAACCGACAGCAACCGTCTAAAAATCAGCTTTTGGGCGACTTACAACATT
GAACGGATCGTCCACAGTGGACTAGGCCGAAAGAAGTACAGACACCTGGAAGGTGATATC
ACCACGGACATTGATTTCGACCTGGAACCGCCATATGCACCCAAGCAGGTTGAAAATGAC
GGCTCTGAGCATGGTGACTCGGGAACCAGCACACCTACTATCAAAGACGACCCCTTAGCT
CGAATTAACGGTTCCAGAGTTCTGAAACGGATTCTTAAGCTGCGCAGAATTGAGTCTGAG
ATTAGAGAACACATTTATCTCGATGACAGGCCTCTCGATGAACAGATTCTCAAGGTGCAA
CCGTTCCTGGACAAACTGGAGGACTGCAAGACGGAGATCATCCAGATTGGAGGCATGGAC
AAGGACCTGCATCACTTGCATTACTCGCGCGTTATGCGTATGCTACTGCAGCCGTTTCTG
GGTCGTCTGGATCCCACGTCTGACCTGTTCCGCAAGTGTGTGACTGCCACCGAAGACATG
ATCAAGATCTTCAAGGAATACTTCTGGAACTCGCAGCGGGGTTTCACCATCTCGTCTATC
CATACCATCTTCGTCTGTGGCCTCACTCTGCTTTACTCTCTGTGGCTGTCCAAGCATCAC
TTTCCCATCCACATTTTGGACGGTATTCGAGACTGTTCGGTGACTCTGGCGATTATGAGC
GCCCGGACACGCCTCGCAAGAGGATATAGAGACACGTTTGAGAACATGACCAAGAGCACG
CTCAACTTCCTCATTTCCAACGGCGCCAGTGGCTGTCTTAACGAGAGAGTCACAAAGTGC
GATGAGACAGGATGCGTTGAAGTTGAGGCTGCTGTTGCTGCAGATGCTCCAGTGGCAGCT
GCTTCACCAGTGGGACAATACTCAGAGCTCCACCCCAGCTATGACGTACGAGTCAAGCGT
GAACAGCAGGTGGCGGCTTCTCCCAAGCCTCCTGTGGCTGCTAATGCTGCTACTGTTCTG
GAAGAACCTGCTCCCGTGGTGGATTACTTTATGAACAACATTAACGATAGGCCCCCTCTT
CCGAACATCCCCAACAGCGACTTTTACTACTACGACGATGATATGCAGAATGTGGTGCAG
GACATCAGCTCATGGGCGCGGCAGACAAACGAGATTGAGGTGTTTGAAAACGGCACGGCG
AATGCCCAGGTCAACACTGGGCTGTGGAGACAGCTTGATTACGGCTTCACCTAGTTATTT
ATTTGGGATGTATTATTGACGGTACAAGATGATAATTACTGTACGGTACAGTACTGTATG
TAGTGTATAGACCATTGTAGGTTTATGATCCGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C01375g_CDS-001

Protein length: 778 aa.
Product: Conserved hypothetical protein

>YALI0C01375g_CDS-001 MKRSISPSGPGAKKSRTTSCERCQRRKQKCDHMLPTCTNCLKAGVTCVQPEKYATKAPEK
DDYVLHLEKKVAMLEDLIARQQGQSRVSDACNGVKESQAHHHHHSHGSLGHNHILSPGIP
LPLQQQGGPTSSPNAPPTPSEPPNRTVSILNVDPNSNSTAPQSFSVVSQRLQDSLWDSHL
ATETNVPVDPSSEGFLIPPQFDFSPYKGDPVEQPSSELADKLLETFFLKVHTRLPMVPRH
EYQQMYRLRFDKPVGAFNSAAYTAYRVRCFRLYIAYAAAAMILDMADQYEGPDYMGYFYM
AMRYGQCAKVDDPCLQIEACLFAIHVLVRCDNEVELYKKFLDIATLLSSQALLHKKETYE
GLSRTDSNRLKISFWATYNIERIVHSGLGRKKYRHLEGDITTDIDFDLEPPYAPKQVEND
GSEHGDSGTSTPTIKDDPLARINGSRVLKRILKLRRIESEIREHIYLDDRPLDEQILKVQ
PFLDKLEDCKTEIIQIGGMDKDLHHLHYSRVMRMLLQPFLGRLDPTSDLFRKCVTATEDM
IKIFKEYFWNSQRGFTISSIHTIFVCGLTLLYSLWLSKHHFPIHILDGIRDCSVTLAIMS
ARTRLARGYRDTFENMTKSTLNFLISNGASGCLNERVTKCDETGCVEVEAAVAADAPVAA
ASPVGQYSELHPSYDVRVKREQQVAASPKPPVAANAATVLEEPAPVVDYFMNNINDRPPL
PNIPNSDFYYYDDDMQNVVQDISSWARQTNEIEVFENGTANAQVNTGLWRQLDYGFT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG