YALI0B22792g

Overview

Description weakly similar to uniprot|P48566 Saccharomyces cerevisiae YNL293W (ohnolog of YOL112W) MSB3
Locus type CDS
Locus tag YALI0B22792g

Location

Species Yarrowia lipolytica Positions 2993483..2995613
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 2131 (nuc.)
Previous locus YALI0B22770g Next locus YALI0B22814g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22792g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22792gYALI0B22792g_mRNA-001YALI0B22792g_CDS-001

Nucleotide sequence

 

>YALI0B22792g
ATGCACCATCAGGATACGTACACAACACCAATGACAACGCGACAGCCGTTTGGACTGAGC
TCCATGCCGGTGGCGTTTGAGAAGGTGTACAAGGACAAAGAGGGCATCGACGACGAGTTC
CACACTCCGCCCCTTGAAGCCTTTGAATTTGAGCGCAGTGTGGACAGCATAGGGGTCGCC
ATGGGTCTGGAAACGGTCCAGCCTGGCCCTAGCGGGCTAGGGAAGGGTCTACAGAACGGC
AAGGCAGGCGCTTCAACAGATACACAACTAGACATGAGTGCCCACCAAATGCCGCCTCCA
CAGAGCATCCCTAACGACACGTCAGGTCATCACATACAACGTCGACCTGTCGACATTGGC
GACACCCCGCCTCTTTCACGAGACTCCATTTATTCTAACGACGAAATCGGCATCATTGAT
TTGTACTCGAAATCTCCCGAGTCGGGCATGACCTCTCAAGGCTCGTCTTCGGTCCCTGTC
AGCAGACAGACAAACAACCCCACAGAAACAACACCAGCCCTGGAGACGCTACAAGCTATC
CCCGTAGCTAACCTGCACCCCGAGCCGAATCCTCGAACCCCTGACTTGCAGAAGACTCCA
TACAACCACGACGCCCCTGGCTCAGCAATCTCCGTGGCCTCATCATACAAGGAGTCCCGA
CGAGAGGCCGGCCGAGTGCGATCGACCATCGACATGCGATCCAAACCGTCGTCGCGCACA
AACACCATGGAGGACGGGCCCCGAGATCGATACGGCTTCCTCAAGGCTAACTCATATATT
CGCATGAACGATTACGACAAGTGGTGGGGCAAGTACCAGCCATATTTACAGCGACGAAAG
AAGAAGTGGGTGTCTCTGATGAAGCAAAGCGGCCTCGATATTGGGGCCGCCGAAGATAAG
GGCAAGGACTCCAACGAGGCCCGAGTTCCCTCCACTGGACCCACTAGGTTCCCCCCCAAG
TCGGAAAAGCTGAAGCGGTACGTGCGAAAGGGCATTCCTGCCGAGTGGCGAGGCCAGGCT
TGGTTCTGGTTTGCCCGTGGCTACGAATACCTCAACGCCAACGTCGGAGTGTACGACAAG
CTCTGCGAGAAGAGCGCTACCATGGACACTGTGGACGCTGAGCTCATTGAGCGTGATCTC
TACAGAACTTTCCCCGACAACGTCTACTTCCGGAAAGCTGAAGGAGAAGTGGATGAGACG
CCCATGATCATGGCTTTGCGAAGAGTCCTGCGAGCCTTTGCCCTGCACCACCCCAAGGTT
GGTTATTGCCAATCGCTTAATTTCCTGGCAGGGCTACTTCTCCTCTTCATGGACGAGGAA
CGTGCTTTCTGGATGCTGCACATTATCACCCAAAAGTATCTTCCCGGAGTGCATGACACC
AACCTCGAGGGAGTCAACGTGGATCAGGGCGTGCTGATGCTCTTGGTGCAAAAGTCGCTC
CCTGCTGTCTGGCGACATATCGGAGTGGGTCTGGAGGGAGCTCCTTCCGAAGGCATGGAC
CTGGTCCGAAATCTCCCTCCCATCACCCTTTGCACAGCCTCGTGGTTCATGAGTGTCTAC
ATTGGTACTCTTCCCATCGAGACTACTCTGAGAATCTGGGATTGTCTCTTCTACGAGGGG
TCCAAGACCCTGTTCCGAATCGCGTTGACACTAATGAAACAAAGCGAGCCGGAGTTTGTG
GGTCTCAACGATCCCATGGAGATCTTCCAGGTGGTCCAGACTTCGCCCAAGTCCATGCTG
GACGCCTCCCACCTCATGGAGTCTTGCTTCAAACGCTACAACGACTTTGGCCACATTAGC
CAAGACGAGATTGCGCAGCTGCGGAAGATTGTCCGGCAGAAGCGTGGTAACGGCGGTACT
GGTGGCATCCAGTCACGGGATGATGTGCTCGAGGAACTCATTCTGTCGCGTCAGCGGCCC
ACGTCGCGAACTTTTGTCTTGCGAAAGCTGCATATTGGCTCCAACAAGTGGTCCATGGAG
TGATCAACAGCAAGCTACAACTAACGGCAAGCCTACTTAACACACAAAAACGCATAGCAT
CATGTCAGTGACAGTATCGAAAACTACCAACATCTGACTCTTTGATTAGAATAGATTACT
TAGCAATTAATAAGCATAATAATGAGATAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22792g_CDS-001

Protein length: 661 aa.
Product: Conserved hypothetical protein

>YALI0B22792g_CDS-001 MHHQDTYTTPMTTRQPFGLSSMPVAFEKVYKDKEGIDDEFHTPPLEAFEFERSVDSIGVA
MGLETVQPGPSGLGKGLQNGKAGASTDTQLDMSAHQMPPPQSIPNDTSGHHIQRRPVDIG
DTPPLSRDSIYSNDEIGIIDLYSKSPESGMTSQGSSSVPVSRQTNNPTETTPALETLQAI
PVANLHPEPNPRTPDLQKTPYNHDAPGSAISVASSYKESRREAGRVRSTIDMRSKPSSRT
NTMEDGPRDRYGFLKANSYIRMNDYDKWWGKYQPYLQRRKKKWVSLMKQSGLDIGAAEDK
GKDSNEARVPSTGPTRFPPKSEKLKRYVRKGIPAEWRGQAWFWFARGYEYLNANVGVYDK
LCEKSATMDTVDAELIERDLYRTFPDNVYFRKAEGEVDETPMIMALRRVLRAFALHHPKV
GYCQSLNFLAGLLLLFMDEERAFWMLHIITQKYLPGVHDTNLEGVNVDQGVLMLLVQKSL
PAVWRHIGVGLEGAPSEGMDLVRNLPPITLCTASWFMSVYIGTLPIETTLRIWDCLFYEG
SKTLFRIALTLMKQSEPEFVGLNDPMEIFQVVQTSPKSMLDASHLMESCFKRYNDFGHIS
QDEIAQLRKIVRQKRGNGGTGGIQSRDDVLEELILSRQRPTSRTFVLRKLHIGSNKWSME
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG