YALI0B22814g

Overview

Description weakly similar to uniprot|Q9UVF6 Yarrowia lipolytica YALI0F12397g RIM21/PalH/PAL2 Putative pH sensor of the Rim plasma membrane complex
Locus type CDS
Locus tag YALI0B22814g

Location

Species Yarrowia lipolytica Positions 2996736..2998357
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1622 (nuc.)
Previous locus YALI0B22792g Next locus YALI0B22836g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22814g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22814gYALI0B22814g_mRNA-001YALI0B22814g_CDS-001

Nucleotide sequence

 

>YALI0B22814g
ATGAAGCGCCTGTCTGTCTGGCGAGATCCGGTGTATCCGACAGACCACCCGGGATGTGTG
CCCATCATCATAACAGAAGGAGCCGTCGACCTAGGCACCACCACGATAACATTACAGGGC
ATGATCGCCACCTTCACCCCAGCATGCTACCACGGCCACCCTGTCGCGGCCGTCGACTCG
AGCGCCATGCATTTTCCGCTCTTCGACCAGATCCAGGAAGGCTGGAAACAATGGACTGAT
ACTCACCAAGGCAAGTTTGGAAACTCGACAATGCCACTGACGTACTCGATGTTGATATCC
ATGGTGGTGGCGTGGATAGTGGTTCTTATTCTCATTCTTGGTGAAAACAGCCACGGCTTT
AGAGCTCCTGTGGAGTCCAACGGTGGGTCAGAGACGACGGAACCATACAAGAGCTCGCTA
CAGTCTGATGGAAGCAGCTCTGCAGACTTTGAGGAGGAAAAGAAGGAATCGAGGATGAAA
CTGCTGTGGATGATATCGTTTGTCATGCCGCATAAGCGACCACGGAGACCGCTGTTGCTG
CGTCTGGGTGTACTGGCTGGAACCATATACCTAACGATCATTTTGGCACACTCGACACAG
CTGATTAACGAACAATACAATAAGGGATACCTCGACAGAAGTGAGCTGGTGGAGCGGCTG
TCATCGTACGTCTATCTGGCTGTGCTGGAGCTGGTGTTTTACTTCATCATGCTGCTGGCA
CAGGTGCAGGTGGTTATGAGAGTCTTCTCCAGACGTATGGAGCAGCGGATGATTTTCTGG
TTGGGTGGAACCATGTCTGTGGTCTGTCAAGTGCTGAATGGAATCACATCTATTGACATG
GCTCTCCAATACCAGTTTTCCGGCTCGCTACCGGCCTTCCAATACCTCTTCCAGGTGGCC
ATCCAAATAATGTACGCCTGCTCCATGGTGTACTATCTAATCACCAACTCGAGGTCCACC
ATGTGCATGGAAATGGTGCCCATGACGCTCATTGCTATTTTGGCATCATCTTCTCCCGTG
GTGTTATTTGTGGTGGACATTGCTAACGCCTGGCTAGTTGAATGGAGTGATTCGCTCACG
TGGATCTCTACGTTGCTTGCTATAGTGTGCGCCTGGGAGTGGATTGACCGTGTGGAACGT
CTGGAACGTCACCACGAAAAGGAAGGCTTCTTGGGTCGCCAGCTGCAAGAAGACGACGAT
TATCTCGGATTCGAGGGTGGAAAATCAATTATGAACCCCAGCGAATTCAGGGAATTCACG
GACGTGTCTCTGGACGCGGATACACCAACTCCAAATGCCGCAAAGCGGTTCGTTCAGCCG
CTCTTGGTGCTGTCGGACCGTATCATCGAGGCAGGACTACTGTTCTCACGTGCTTCGAGT
ACCTCTTATGACTCTGTGGACCAGCCAGATCCCCAAGAACTTCAACACAATACTCACGCA
GCTCATGCTCGAGGACATAGTTCGGTGCGTTCACAACTGGCCAAAAAGCTCGACTATTAC
TACTCGAAAAAAACTAGGCCGCCTCCGGAACTGCTGGACACTCAGCATATGCCTGTTCAT
CGGCACTAATTTATTTATTTACTAACTGTACATTAGACTGAATACATTGCAATAGCTACA
TA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22814g_CDS-001

Protein length: 523 aa.
Product: pH-response regulator protein

>YALI0B22814g_CDS-001 MKRLSVWRDPVYPTDHPGCVPIIITEGAVDLGTTTITLQGMIATFTPACYHGHPVAAVDS
SAMHFPLFDQIQEGWKQWTDTHQGKFGNSTMPLTYSMLISMVVAWIVVLILILGENSHGF
RAPVESNGGSETTEPYKSSLQSDGSSSADFEEEKKESRMKLLWMISFVMPHKRPRRPLLL
RLGVLAGTIYLTIILAHSTQLINEQYNKGYLDRSELVERLSSYVYLAVLELVFYFIMLLA
QVQVVMRVFSRRMEQRMIFWLGGTMSVVCQVLNGITSIDMALQYQFSGSLPAFQYLFQVA
IQIMYACSMVYYLITNSRSTMCMEMVPMTLIAILASSSPVVLFVVDIANAWLVEWSDSLT
WISTLLAIVCAWEWIDRVERLERHHEKEGFLGRQLQEDDDYLGFEGGKSIMNPSEFREFT
DVSLDADTPTPNAAKRFVQPLLVLSDRIIEAGLLFSRASSTSYDSVDQPDPQELQHNTHA
AHARGHSSVRSQLAKKLDYYYSKKTRPPPELLDTQHMPVHRH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG