YALI0B21868g

Overview

Description weakly similar to uniprot|Q20683 Caenorhabditis elegans F52H3.5 protein
Locus type CDS
Locus tag YALI0B21868g

Location

Species Yarrowia lipolytica Positions 2867946..2868650
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 705 (nuc.)
Previous locus YALI0B21846g Next locus YALI0B21879t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21868g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21868gYALI0B21868g_mRNA-001YALI0B21868g_CDS-001

Nucleotide sequence

 

>YALI0B21868g
ATGTCCAGCGCAACTCATCTGTCTACCCACGACCAGGTCGTTCTGTCGAAACTCCTCAAT
CCGGGCGAGCTGGAGGAGCCTACTCAGGCCCAGCAAAAACGCATCCAGGTCAACGCCTAT
CTTCCCCCAGACCAACACGTTTCTGTGGAGCTTGTGGAGAAGTTTGTGCAGATTGAGAAG
ACGGTGATTGAGTCTGTTGACAAAGACGACTCTGTGGCCAACGTCAAACGCGCCATCGAG
AAGCTCAAAGAGATCATTGTCGAGGCCCCCAAATACGCCTCCGTCTACAACAACCTGGCT
CAACTTGAACGGATTTTGGACCAGAAAGGCGAGAAATCCGCCTCAAAGCTGGATGTCATC
TCCAATTTAGAACGAGCAATCAAGCTGGCTGGTCCCGATCAGCTGATCATTTCAAAGATG
CAGGGTACGGTGCTGCAGCAGGCTTATGCTCAGCTGGGCCAGATTTACATGGAGGGTAGA
AACAACGAAGGCGACTCGTGGGGAGACGAGGAGAAGGCGTCTGAGTGTTTCCGACGAGCA
GGAGAGTACGGCAACAAGATTGCTGCCGAGCTGGCTGTCAAGGTCAATCCCTACGCTCGT
CTGTGTGGGAACATTGTCAGAGAAGCTCTAATTGAGGAGGGTAAGAAGTGGGAGCAGTTG
AAGGAGGAATAATTATATAGTCTCAAAGCATTATTTATACAACTG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0B21868g_CDS-001

Protein length: 224 aa.
Product: Conserved hypothetical protein

>YALI0B21868g_CDS-001 MSSATHLSTHDQVVLSKLLNPGELEEPTQAQQKRIQVNAYLPPDQHVSVELVEKFVQIEK
TVIESVDKDDSVANVKRAIEKLKEIIVEAPKYASVYNNLAQLERILDQKGEKSASKLDVI
SNLERAIKLAGPDQLIISKMQGTVLQQAYAQLGQIYMEGRNNEGDSWGDEEKASECFRRA
GEYGNKIAAELAVKVNPYARLCGNIVREALIEEGKKWEQLKEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG