YALI0B21340g

Overview

Description similar to uniprot|Q9C2C8 Neurospora crassa Probable gamma-adaptin
Locus type CDS
Locus tag YALI0B21340g

Location

Species Yarrowia lipolytica Positions 2799203..2801744
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 2542 (nuc.)
Previous locus YALI0B21318g Next locus YALI0B21362g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21340g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21340gYALI0B21340g_mRNA-001YALI0B21340g_CDS-001

Nucleotide sequence

 

>YALI0B21340g
ATGACGTCTCTGAAATCGTTCATCAAGTCCGTGCGTGCGGCCAAGACGCTAGCAGAGGAG
CGGTCGGTGATCCAGAAGGAGTCTGCCGCCATCCGAACATCGTTCCGAGAAAACTACGTC
GACCCCAACATTCGAAAACAAAATGTGGCTAAGCTGTTGTATTTGTTCACCTTGGGTGAG
CGAACACATTTCGGTCAGGTGGAGTGTCTGAAGCTGATTGCTAGCCCGCGCTTCAGTGAG
AAACGTCTGGGATACCTCGGTACTATGCTGTTGCTGGATGAGAACCAGGAGACCCTGACT
CTGGTGACCAACTCTCTGTCCAACGATCTCAACCACCCCAACCAATACGTTGTGGCTTTG
GCCCTGACCACCTTGGCCAACATTGCATCCACCGAAATGGGCCGGGATCTGTTCCAGACC
GTCGACAAGATCATGTCGTCCAGCAACCCCTACCTGAAGAAGAAGGCTGCCGTGTGTGCT
GCTCGAATCAGCAGTCGAGTGCCTGAATTGGCAGAAATCTTCGTCGAGAAGGCCAAGATT
CTGCTCACAGATAAGAACCACGGCGTGCTGCTGTGCGGACTCACTCTGGCCACTGACATT
TGTGTCCAAGACGACGAGATTCTCGAGCAGTTCCGACCCGTCGTGCCGACTCTTGTCAAG
CTGCTGCGCCAGCTGTGCACCTCGGCTTACGCTCCCGAGCACGACGTGACCGGAGTTACC
GATCCGTTTTTGCAGGTCAAGATTCTTGGTCTGCTGCGTGTGCTGGGAGCTGGAGACGCG
TCTGCCTCTGACGCCATGAACGACGTGCTTGCCCAGGTGGCATCCAACACCGACTCCGCC
AAGAACGTCGGCTCCTCTGTGCTGTACGAGTGCGTGCGAACTATTTTCGCCGTCGAGGCA
GACACCGGTCTGCGAGTGCTGGGTGTTAACATTCTTGGAAAGTTCTTAGCCACCACTGAC
AACAATACGCGGTACGTGGCGCTCAACACTCTGCTCACAGTCATCGACATCGAGCCCGCA
GCCGTGCAGCGACACAGAAACACCATTGTCGAGTGTCTGCGTGACGCTGACGTGTCTATC
CGACGACGAGCTTTGGCCGTGGCATACGCTCTCATCAACGAGAGCAACGTGCGAGTCATT
GTTAGAGAGCTGCTGACATTCTTGGAGTCTGCAGACGCCGAGTTCAAACCCTCGGTCACC
GCCCAGATCGCCATTGCTGCTGAAAAATACGCTCCTAATAAGCGATGGCATATTGACACT
CTGGTCCGGGCTCTGGCTCTGGCTGGAAGTCACGTCCCAGAGAATGTGGTCTCTTCGTTC
ATTGCTCTGGTCGTCACCTGCGACGAGGAGCTACAGCTGTACACTGTCCAGAAGCTGTAC
TCAGCTCTGCGGGCCGATTTCACCCAGGAGGGTCTGTCCCTGGCCTCGCTGTGGCTGCTT
GGAGAGTTTGGCCACATTCTTATTCGATCCGGCAACTTCTCGTCGGAAGATGGAGAGTCC
CAGGAGGTATCCGAGGAGTCTGTTGTCACCATGATCGAGAACCTGCTCAAGTCTGCCTAC
GCCTCTGATGTTGTGCAAGAGTACGGAGTCAACGCCCTGGTTAAACTCAGCACCCGAATC
AACAATGCTACACAAAAGGAGCGGGTGCGACGAATCCTGGAGTCGTACGCTTCCTCTCTC
AATGTGGAGGTCCAGCAGCGATCTGCCGAGTATACAAAGCTTTTCTCCAACATGGGTGTG
GCCAAGGGTGTGCTTGAAAAGATGCCTGCTCCCGAGCTCAAGAACGATCTTGGCAAGAAG
TACGCCAAGCCTAAGAAGGCCAAGAAGGTGACTGCTTCCAAGAAGGATGTCGACTTGCTG
CTCGATCTGGTCATGGACGCCCCTGAGCCTGCTAACGGAGGAGGATCTTCTTCCGCAAAC
AACTCGGATCTCCTGGCCGACATTCTGGGACCCTCTTCTCCCTCTGGAGGTGCGTCCGTC
GCCACCCCTAGCTCCAATCAAAACATTATGGATCTGTTTGGCTCAGGCGCCCAGTCATCC
CCCGTCTCCACACCCGCCTCAGCCCCCGCTGCTGCGGCATCTACAATCTCCGCATACTCC
GGCAACGGCCTGTCTCTGGGCTTTTCCGCTGGAACCGCCCAGGGCCTCACGGTGCCCATC
ACCGCCCACTTCTCCAACACCGGTGGCAGCCCCATCTCCAGCATTTCCCTCCAGGCCGCT
GTGCCCAAGACACAGAAGCTCGCTCTGCAGCCACCAGCTTCCCAGAGCATTGGTCCTGGC
AGCACCACCACTCAGCAGTTGCGAGTGACGGTACAGGGTGCTGGTGCTGCCGTCAAGTTG
CGAGTCCGGCTGGGATTCTCTGTCAACGGCCAGCAGGTCCAGGAACAGTTTACCTTTGAC
AAGTTTGGTCAGGTGGTTTAAGTGGTATAACAATAATAGAGGGATAATAATCTATACTGT
GTTGCAAGGAATTCAGTTTCAATCGGTATACTGCGTTGCAGTATAACTGTCGTAAAATGT
ATGTGATAGATTACATAAGCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B21340g_CDS-001

Protein length: 807 aa.
Product: Gamma-adaptin, putative

>YALI0B21340g_CDS-001 MTSLKSFIKSVRAAKTLAEERSVIQKESAAIRTSFRENYVDPNIRKQNVAKLLYLFTLGE
RTHFGQVECLKLIASPRFSEKRLGYLGTMLLLDENQETLTLVTNSLSNDLNHPNQYVVAL
ALTTLANIASTEMGRDLFQTVDKIMSSSNPYLKKKAAVCAARISSRVPELAEIFVEKAKI
LLTDKNHGVLLCGLTLATDICVQDDEILEQFRPVVPTLVKLLRQLCTSAYAPEHDVTGVT
DPFLQVKILGLLRVLGAGDASASDAMNDVLAQVASNTDSAKNVGSSVLYECVRTIFAVEA
DTGLRVLGVNILGKFLATTDNNTRYVALNTLLTVIDIEPAAVQRHRNTIVECLRDADVSI
RRRALAVAYALINESNVRVIVRELLTFLESADAEFKPSVTAQIAIAAEKYAPNKRWHIDT
LVRALALAGSHVPENVVSSFIALVVTCDEELQLYTVQKLYSALRADFTQEGLSLASLWLL
GEFGHILIRSGNFSSEDGESQEVSEESVVTMIENLLKSAYASDVVQEYGVNALVKLSTRI
NNATQKERVRRILESYASSLNVEVQQRSAEYTKLFSNMGVAKGVLEKMPAPELKNDLGKK
YAKPKKAKKVTASKKDVDLLLDLVMDAPEPANGGGSSSANNSDLLADILGPSSPSGGASV
ATPSSNQNIMDLFGSGAQSSPVSTPASAPAAAASTISAYSGNGLSLGFSAGTAQGLTVPI
TAHFSNTGGSPISSISLQAAVPKTQKLALQPPASQSIGPGSTTTQQLRVTVQGAGAAVKL
RVRLGFSVNGQQVQEQFTFDKFGQVV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG