YALI0B21318g

Overview

Description similar to uniprot|Q6CHS1 Yarrowia lipolytica YALI0A05665g, arrestin motif containing protein
Locus type CDS
Locus tag YALI0B21318g

Location

Species Yarrowia lipolytica Positions 2792081..2793751
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1671 (nuc.)
Previous locus YALI0B21296g Next locus YALI0B21340g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21318g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21318gYALI0B21318g_mRNA-001YALI0B21318g_CDS-001

Nucleotide sequence

 

>YALI0B21318g
ATGTCCATCAACATCTCCTACCAGGAGACCCATCTGGATCTCCCCCATATGCCCTGTGAA
GAATACGATGATCAATTACAACCCAGCCGGAGCACCACCTCGTCGGTAGCCCCCTCAATT
GCTACCAGCACCCGGTCTCGAGCTTCCACCCTCACATCGTCATCCAACAACTCCACTTCC
ACAACCGCAACTACCATCGACCCTTCGTTACCATCGTTCGAGGAAGCTGTCAACGAGCAG
TTGGCACTCACCATTGACTTTACCCCAACTGTTACCGTCAAGTACACCAAGAGTACCCGA
GTCAAGAAGATGACAACCACTCTGACCCGTCATGTGATCGAGCCTGGCCTGACCCAGACC
GACGAGGTTGTGGCTCAATGGGATCTTCTCTCTGGCCGAACCGAGCCCACCGAGGGAACC
ATCTCCGACCTTGCCACTCCCATCACTATCGAACCCTCCACGCATCACTACGCCCTCAAG
TGCACTCTGCCTGCTAGATTACCCGAAACCGCATCCCACAAGTCCAGCAGACTGTGGTAT
ACTCTGGATACCCAGGTTTCTCGAACCAAGTCTTTCTTCTCCACGGCTGGTCCCTTGGAC
TACTCCGAGGAAATTATGATGGCTCGAAACACCCAGACTGACGCCCAGACCATTCTTCCC
GTCTCCGCCTCTGTTCCCTGGCTCAACAAGCTGAAGTATTCGGTCTCCTACCCCCAGAGA
CACATTTCTCTGCAGGAGGGAATGGAGATCCCCATCAAGCTCACCACCACTCTGTTTGAG
AAGCCCATTCGACTAAACTCCGTCAAATTTGCTGTTTCTCAGACCTGTAACTCCAATGCC
AAGGATAAGCAGCAGACCGATCTTTTGAACGACTACTCCAGCCGACATATGACTTCTGAC
CTTGCAGAACTCGACGAGATGGAGCTCAACAACGCTCGAGAACAAGGCTTTGATGTCGAG
ACCACCTTCCTGGATTCCACTCACAAGGGCAACCTGCTTATTCCCGGATCCGAGGAGACC
GAGCTCGAGTACACTCTCAAGCTGGATGCCAGAGCCATTCAGAAGCTATCTGCATCTACC
TCTTACACTCATCCTCTGCATGTGGTGCACAAGCTGTTCACTTCTCTGCGATTCTCATAC
CTGGCTCCCACTGACAAGCCTAACCATAAGAAGCGACGATACTTTGACGTCTCTATTTCC
ACCCCTCTGGTGCTGTCCCGGGCCAAGGACGACTACTTCGCCGCTCAGCTGAGTGCCGCT
TCCAGCCGAGCCTCGTTTGACTACGATGACTTCCTGCTGTGCGAGTACCCTCGGCTCAAG
AACACGGTGTTTGAGAACGACTTTGCCAACGACTCTGCTCCTTCTTACGACTCTTTCATG
GCTCAGGCTGCCGCCGCCGCTGCTGCTGCTGTTCCCGCTCGAACCTCTCTTGACGACGAG
GCTCCCGAGTGGTCTTCTCCTAACGACGATTCCGACTCTGACTCCGATTCCGACTTTGAG
AGCGATTCTGCTCCTGTGGCTCCCATTGCCATTCCCCAGCGAATAACCCAGGCCAAGCAG
CAGCCCTTCACGGCTTCTCTGCCCAGCTATTCCTTTGCTCAGAACTACTAACGACCCTAA
CCAAAAGCTAACGAACGATAGATTAATGAATTATGATATATACTTACACTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B21318g_CDS-001

Protein length: 537 aa.
Product: Conserved hypothetical protein

>YALI0B21318g_CDS-001 MSINISYQETHLDLPHMPCEEYDDQLQPSRSTTSSVAPSIATSTRSRASTLTSSSNNSTS
TTATTIDPSLPSFEEAVNEQLALTIDFTPTVTVKYTKSTRVKKMTTTLTRHVIEPGLTQT
DEVVAQWDLLSGRTEPTEGTISDLATPITIEPSTHHYALKCTLPARLPETASHKSSRLWY
TLDTQVSRTKSFFSTAGPLDYSEEIMMARNTQTDAQTILPVSASVPWLNKLKYSVSYPQR
HISLQEGMEIPIKLTTTLFEKPIRLNSVKFAVSQTCNSNAKDKQQTDLLNDYSSRHMTSD
LAELDEMELNNAREQGFDVETTFLDSTHKGNLLIPGSEETELEYTLKLDARAIQKLSAST
SYTHPLHVVHKLFTSLRFSYLAPTDKPNHKKRRYFDVSISTPLVLSRAKDDYFAAQLSAA
SSRASFDYDDFLLCEYPRLKNTVFENDFANDSAPSYDSFMAQAAAAAAAAVPARTSLDDE
APEWSSPNDDSDSDSDSDFESDSAPVAPIAIPQRITQAKQQPFTASLPSYSFAQNY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG