YALI0B21296g

Overview

Description weakly similar to uniprot|M2T7V3 Bipolaris sorokiniana hypothetical protein COCSADRAFT_317071
Locus type CDS
Locus tag YALI0B21296g

Location

Species Yarrowia lipolytica Positions 2790391..2791333
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 943 (nuc.)
Previous locus YALI0B21274g Next locus YALI0B21318g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21296g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21296gYALI0B21296g_mRNA-001YALI0B21296g_CDS-001

Nucleotide sequence

 

>YALI0B21296g
ATGCCCAAAGTGGAGATCAAAGAAGTCGAAGGCGACACAATCGAGCTCGATGGAATGAAG
ATCCCGTTGAGAATGCCCACCAGGGGACCTTCAGGACCCACTCTCATGGACCAAATCGAC
TCTCTTAAGCAGAAGCAGACAGAAAAGGAGGCGAAGGCCCAAGGAAGGCCCATCCCCGTC
TATAAACCGCAACCACCTCGAACCACGAAGGAGGGCAAGCCACTTCGATACAGGAAAGTG
GCTGTACGAACCCAAGACGATGTGTACGACGATGACGCCGAAGATGAAGATGAAGAAGAC
ACAGGGATCCCCACAGACTCGAAATGGTTCGAGTTTCTCGACTTTTGCATGTATCTGATT
CCCTTGATGAGCGTACACTTGGTTCTGGACGTGTTAGTACAAAAGCAGTACGGAGGCGGA
GACCTGGATCCTGCTCTGTATGGGCAACCCTTCCCCAAACGAGGAGACCTTGATTCCCAC
AGCATCCAGATTAGGCGCCAAGAGCTGTCCACAATCATTCAGGCTGCAAAGCGGTCCCTT
ACCTCTATACCTGTTCTGGCTGGTCTGCATGCATTTTGTGCTCCTTATGTGAATGCCATC
AGTAAGCTGCAGCGGGGTCAGGTCGAGGATGACCGGCAACTCCCTCGGGGCATTCGGGTG
TTCCGAGTGGTCACATTTGCTGCATCCATCGCGATTGGGTGCTACATTCTCTATGCTGCC
AACGAGCAGGGCTACATGGCTGTAATGAAACGGGCTCCTCCTCTTGGCACTCTGTGGGTA
TGGCTCATTGTGGAAATGGAATGGAACTGGGGTGCTCTTTCGCTCGTGGTAGTTTGCATG
TGGTCTTATATGAGAGGTTATCTTAGTTGATGACAATGGTGACAATGGTATGTACAGTAT
GTACTTGTATATGATCTACCCAATACACGACGTCATGGAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B21296g_CDS-001

Protein length: 290 aa.
Product: Conserved hypothetical protein

>YALI0B21296g_CDS-001 MPKVEIKEVEGDTIELDGMKIPLRMPTRGPSGPTLMDQIDSLKQKQTEKEAKAQGRPIPV
YKPQPPRTTKEGKPLRYRKVAVRTQDDVYDDDAEDEDEEDTGIPTDSKWFEFLDFCMYLI
PLMSVHLVLDVLVQKQYGGGDLDPALYGQPFPKRGDLDSHSIQIRRQELSTIIQAAKRSL
TSIPVLAGLHAFCAPYVNAISKLQRGQVEDDRQLPRGIRVFRVVTFAASIAIGCYILYAA
NEQGYMAVMKRAPPLGTLWVWLIVEMEWNWGALSLVVVCMWSYMRGYLS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG