YALI0B21010g

Overview

Description similar to uniprot|G0RG30 Trichoderma reesei predicted protein
Locus type CDS
Locus tag YALI0B21010g

Location

Species Yarrowia lipolytica Positions 2762712..2764388
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1677 (nuc.)
Previous locus YALI0B20988g Next locus YALI0B21032g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21010g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21010gYALI0B21010g_mRNA-001YALI0B21010g_CDS-001

Nucleotide sequence

 

>YALI0B21010g
ATGCAGTTCAAAAACCCATTTGTCAAGGAAAAGGCTGTATCTGCGGCTTCCGTCGACTAT
GAGACGGCTGAGGTCTCTTCTACTGAAGGCCTGTCTGCAACAGAAGACGAAAAGTTCGAC
GGAGTCCTCGACGGATCTGGAGATCACAAGAACCCATTCACTGATCCAAATGTTGCTGAA
AAGTTCCGACAGCTCTATGAGGACTCTCAATACGAAAGCAGACATGTGTTTGATCCCGAT
TTCGAGTGGACCAAGGACGAAGAGAAACGTGTCAAGAGAAAGATGGAGTGGAGGGTCGCT
GGCTGGGCATGTATTATGTTCTGGGGACTGCAGATTGACCGAAACAACTTGGCTCAGGCT
GTGTCTGATAATCTTCTAGAAGACCTGAAGCTGACCACCAACGAGTACAACTACGGAAAC
ATGATCTTCTATCTGTCTTTCATGAGTGCTGAGATTCCGTCTCAGCTGGTTTCCAAACGT
TTAGGTCCTGATCGGTGGATTCCAATCCAGATCTGTCTGTGGAGTGCGGTAGCCATGTGT
CAAGGAGCCCTTCAGGGAAAATCTTCGTTCTATGCTACGCGAAGTCTCATTGGTCTCTTG
GAGGGAGGATTCATTCCTGACCTGGTTCTTTGGTTGTCGTACTTTTACACCTCAAAAGAA
TTGTCCATCAGACTCTCCTTTTTCTGGACTGGTTTGTATCTCGTGAACGTTCTGACTTCG
CTCTTGGCCTTTGGAATTTTGAGAATCCACTCTGGAGGTTTGGCTGGCTGGAGATGGCTG
TTCATCATTGAAGGACTCATAACTCTGTGTATCGGACTAGCCTCTTTTTTCAGAATGCCA
GCTTCGGCTGTCAGTACCAAGAAGTGGTTCAGACCAAACGGTTGGTTCACTGACCGAGAA
GAGAAGATTGTGGTCAATCGAGTTCTACGAGACGACCCGTACAAGGGTGACTTTCATAAC
CGACAAGCAATTACCCCATTCACTCTCTACAAGTGTCTGTCTGACTTCTACATGTGGCCC
ATCTATGCCATTGGTCTTCTGGCATACATTGGAGACAGTCCCGAAGGAACCTACTTGACT
CTAACTCTTCGACACCTGGGTTTTTCTCCCTTCAACACAAACTTGTTGACCATCCCAGTG
AGTGTTCTTAAAATGATTCTTTTGTTGTCCTTCACTTGGCTGTCTGAAAAGATCAATGAG
CGGTCCCTCGTCAGTATCATTCAACCCCTGTGGGTCATGGTATTGGTGATTGCTCTCCGT
TTCTACCCTGAATCGGGTATTAATGTCTGGTGTACCTACACCATTCTAGTCCTTCTTCTT
GGAGGGCCCTACATCCATGCTGTTGTTGTGGCATGGACTTCCAGAAACTCCAACACTGTG
TCTCAAAGAACAGTGTCTGCCGCCATGTACAACATGTGCGTCCAAGCTGGAGGTGTTGCT
GCCACACAGATCTATCGAAAGGATGATGCTCCATTCTACCACAGGGGAAACACCCAACTG
ATTATTATCAGTGGAGCAACAATCGCTTTGCTCATTGTGACGAAGATCTTCTATGTCACC
ATTAACAAACGAAGAGATCGAAAGTGGAGCGCCATGTCCAAAGAAGAGCGAGAGGAGTAC
GCTCAAAACTCGACAGACAAGGGAAGTCGGCGGTTGGATTTCAGATTTGCTCATTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B21010g_CDS-001

Protein length: 559 aa.
Product: Conserved hypothetical protein

>YALI0B21010g_CDS-001 MQFKNPFVKEKAVSAASVDYETAEVSSTEGLSATEDEKFDGVLDGSGDHKNPFTDPNVAE
KFRQLYEDSQYESRHVFDPDFEWTKDEEKRVKRKMEWRVAGWACIMFWGLQIDRNNLAQA
VSDNLLEDLKLTTNEYNYGNMIFYLSFMSAEIPSQLVSKRLGPDRWIPIQICLWSAVAMC
QGALQGKSSFYATRSLIGLLEGGFIPDLVLWLSYFYTSKELSIRLSFFWTGLYLVNVLTS
LLAFGILRIHSGGLAGWRWLFIIEGLITLCIGLASFFRMPASAVSTKKWFRPNGWFTDRE
EKIVVNRVLRDDPYKGDFHNRQAITPFTLYKCLSDFYMWPIYAIGLLAYIGDSPEGTYLT
LTLRHLGFSPFNTNLLTIPVSVLKMILLLSFTWLSEKINERSLVSIIQPLWVMVLVIALR
FYPESGINVWCTYTILVLLLGGPYIHAVVVAWTSRNSNTVSQRTVSAAMYNMCVQAGGVA
ATQIYRKDDAPFYHRGNTQLIIISGATIALLIVTKIFYVTINKRRDRKWSAMSKEEREEY
AQNSTDKGSRRLDFRFAH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG