YALI0B20988g

Overview

Description weakly similar to uniprot|Q9P347 Schizosaccharomyces pombe SPAC19B12.12c SPAPB17E12.02 Survival of motor neuron protein-interacting protein yip11
Locus type CDS
Locus tag YALI0B20988g

Location

Species Yarrowia lipolytica Positions 2761852..2762734
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 883 (nuc.)
Previous locus YALI0B20966g Next locus YALI0B21010g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20988g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20988gYALI0B20988g_mRNA-001YALI0B20988g_CDS-001

Nucleotide sequence

 

>YALI0B20988g
ATGAAGCGAAACCTGGAGGAGTACACGGCAGGACCGTTGAACGAAGATACAGGCCAGCGA
TCGGCATTTCCGCTGGACGAGCAAGTGGCCGACCTGGACCTTGAAGGGCCCCCTATGGAT
GTCGCTCAGTATCTAGCCCAGGTGAAACGAGAAGCAAACCAGAGTCCAGCATTTACGACA
GTCAAAGGACAGAGACGTGCCACAACACCCTCAACATACTCGAAGAAATACACGGAGATG
TCTCTTGTTATGCCACTATCTGTTATCAACGAGTGGAGAGTGGAGATCAGAAAGTCATTC
ATGGAGTTACGGAAAACTGTGCAATCGCATGGAGATGAACGACCTGAACTACCAGCTGAT
TCAGAGCTACCGACAACATTTTCAAAATGGAAAACGTTCATTTCGGGCTCTTCTTCTCCC
GAACCAACACTACAATTCATTGCATCGTTGCCCCACCAGCAATTGTTCATGCTCTTGGAG
TACTGTCATAAATGGCTGGGACCTAAAATCAGCCGTGGTCTCAGTATATGGCTCATGGGT
CTGTTGTCGTGTCTGCCCGACATTCTAGACGCGTCAGAGCAGGCGTCAGTACGGAGTCTG
GGTAAACGAGCTCTGGAGATTCTACAGAACCCCAAATATGATCGACTGACAGACGTTACG
GAATTTGCATTGAAATCAGTCGTCATCATTTGTGCCGACGTCTACCACCAGCATGATCTC
GTCGAAACTGTTGCAATTATGGAACGAGAACGTCCTGTTCAAGTGAATGAGATTGTTCTT
GACTACTAAGCATTACACGTCGGAGATACAACTATTACTTGTACTTGTACAACACATCAA
TTTTTATAAGTTATGCATGCTTAATGAGCAAATCTGAAATCCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20988g_CDS-001

Protein length: 263 aa.
Product: Conserved hypothetical protein

>YALI0B20988g_CDS-001 MKRNLEEYTAGPLNEDTGQRSAFPLDEQVADLDLEGPPMDVAQYLAQVKREANQSPAFTT
VKGQRRATTPSTYSKKYTEMSLVMPLSVINEWRVEIRKSFMELRKTVQSHGDERPELPAD
SELPTTFSKWKTFISGSSSPEPTLQFIASLPHQQLFMLLEYCHKWLGPKISRGLSIWLMG
LLSCLPDILDASEQASVRSLGKRALEILQNPKYDRLTDVTEFALKSVVIICADVYHQHDL
VETVAIMERERPVQVNEIVLDY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG