YALI0B20834g

Overview

Description some similarities with uniprot|P39955 Saccharomyces cerevisiae YER047c SAP1 member of the AAA-protein family
Locus type CDS
Locus tag YALI0B20834g

Location

Species Yarrowia lipolytica Positions 2740219..2744686
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 4468 (nuc.)
Previous locus YALI0B20812g Next locus YALI0B20856g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20834g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20834gYALI0B20834g_mRNA-001YALI0B20834g_CDS-001

Nucleotide sequence

 

>YALI0B20834g
ATGGCAAACTACAGTCTGTTTGGCGGCCCGACGCAGCTCCAGCAACAACTGCAAAACATC
TACGACGATGCCCACGAGGGCACTCTTCAGGCTGTGCTCCTAGAGACGGCCCAGCAAGAC
GGCCCCGCTCTCCAGGCTTGGACGTTGTGCCTGTTTTCCATCAATGCCAAAATCAAGCAG
GTGGAGAACTCCAAGCCCCGCAGCGACACAGAACGAGGCCTGCTCAACTCCATTCTTGAG
CTTGAGCAGGAGTGTCGAGAACGCATTGGCAATCTCGAACGCAAGAAACAGGTGTCGACC
AACCCTTATGTGACCCAGGCATCGCTGCCGTCGCTCAACAATCTGTCGCTGGGCAATTCG
TCGGCTCCAGTCCCTCCGTCCCATGGCGCCAGCTCCAGCAACATCCACAATCCCTTCCAG
GGCTACGACTCTCGACAGCAGCAGCAGCAGCAACAGGTGCCACCTCAAGTGCGACCGTAT
TACCAGACTCAGCAGAGCCAGCAGTCACTGCAGCCGGCCCTCCAGCCTCAACACTCCAAC
CCCAGCTCTAGCAGTGTCAATCGATACAACGTTCCTCGAAAACAGGTTCCTGGTTCGTCG
TCCAACATCAACACGTCGCCCCAGAAGCCCCAACTGCTTGATCTGGATCTGTCACCAGGC
AAAAACGATACCCCCAAAACCAGCAACCTGCTGGCGCCGCCTGTAGACTTTGATCGACCT
AAGCCCGTTGTGGCACCGGTTCAGACACAGTACCAGTACCCCCCTCAACAGGACTTCCAG
CCTGTCGAGCCCGAGGTACGCAAGGAGCGATACGAAGACAGATCGCAGGAACGACAGTAC
AATTCAGCCGATTTCAGTGAGTATAGAGATGAAGATAGGATAGGAAGGATACACGATGAG
GATACAGGATCAAAATCTATGTTGGTACATTTTGGAGCACGTGACCAGACTCTATTGTGA
AGACAGGCTATGGTGCTCGTAGCTGAGAGGTTTCTGCAATGGGCTGATGCACAGCGAGTC
AAACGAAAGAAAGAGTGAGTGATATGTGGGGTGAATTATTATCGACTAGTGAGGCAGGCG
GAGGTAGCTGGACTGACCATATCTCATGTGACAGCCGGTTGACAGCTACATTGCAAATGA
CGCCTCGTCTCGCGGTTAGTCGCGTGGGTATGTCTTATGTTCGGCCTACTTGTAGGGTTG
TCCGTTGGTCACGTGGTTCTCCCCACCCGACTAATACCGCATGCTCGATAATTTTTTTAC
TCCCCGCCCTACTCAAAACTGTCCATCCCTCATTGTCTTTAACCTCACGGTTTAACATCT
CTCAAGCCTCACTTGCTGTCTTCATGGAGCATGAGTGAAGAAAAATAAACTTGGGGTGCG
AAGCCAAAGGCACATCGGCCGGTGTCTGGTCACATGTGCGGTGCAACGTTTGGGCACACC
GTGACGCCAGCAATGTTTTGTTATTGTCAGGTCGTGTGCGCATCGTTCATGCAGCGTAAG
GGGTGGAATCGGTTGCACGAGCCCAATCCTGCAATTTCCCATTTCCTGGCGATAGCAAGG
TTTCAGCGACTAGTTTTTTGGGTGCGGGTTTTAATTTGATTTCCCAGTCTTTGGGGGGCT
CTTTGAGAGGTGCAGTAGGTTATTGAGCGAATCGGTGGGTTGAGGCTTCTGAGCCAAAAC
ACCTTTTCGACATCTCTGCCTTTCGGCGCCTAGGCTTCTTTTTGTGCCTTGCTTTGTTCG
ACGCCCTTGCCCCATACAGCGAAACACAACATCATCCCCCCCCTTCAATCTACAGTGCTT
GTTGCTCTCCCAAATTACCCTCCCTTACTGCGTCCTGCACATCCACGCATTGTTGTGCCT
GCTAAACAATAACATTGGGCCAAGTTAAAAAGCTTGGTGAGCAGAGCCGGCAAGTGTAAT
TGTAAATCAGGCCGCACACCACCACTACCAACATACTTTTTTCCCCCGTCTCCTCTAGAC
CCTACCACGTTTAGACGATAACACGAGAGGTCAACCCGGCATACGGACAATTCACCGGCC
CACCACGTGATAGTCCTCCAGCGTCGAAACCGCCCACCACGCGCACATCATCGCACGCAC
ATCGACTAACCCTAGCTCCCATCTCCGCCCATCAACGGTCCACCTCGTCGTCTTCCACCG
TATACACGCCCGTCAACTCACGGCCCGATCTCCAGCCCCTCTCGTCAGCGTCATCGCCTA
TCGACGCCCCGCCCTCGCCGCCCAAACGAGAGATGCTCAAGACCCTAAGAGGCGCGACCT
CGTCCAAGAAGCAACCGTCGGCGTCCACCGCCAACGAGGCGCCCCTCAAGGGAGCCTCCC
TCGCCTGGAAATTCAAAAACTTTGGCAAGAGCCAGGAGGACAAGAAACCTGAGCAACCCA
AGCCGGCCAAGGTGAAACCCACCCGTTCCAATGCCCCCTCGGTGAGCTCTCAGGCCACCA
GACCCAACTACTCCACGACCTCTGTCAACACCACCACCAACACGACAACCAGCTCTATCC
CACAGAGCACAAAATCAAACAACATCAAGTCCATGTTGCTTGACGATGACGAGCCTGCTC
CTGTGCGCCAAGCTCCTGCCCCAGTTCAACAGCAGCAGCCAGCAGCTGCCGTTCAGCCCC
CCGCTCCGGCTGCCCACCCCGTACACCCCGTACACCCTGTACACACCCCTCCTCCTGCAC
ATACCCACTCTCCCCCCCCTCACGTGACCCATGCCCCTCCTCCCACAAAACAGACTCCCA
CCGCTCACCAGGCTACTTACAATGCTCTGCATGGCCAGGCTCGACGGTCTGGTGAGGTGC
GACGCTCGGGCGAAATGACTCGCCGATCAGGAGAGAACCGACGCAGCGGTGAAATTCGAC
GAGCCCGGCCCACCAGCGGTATCTCTGTGCGCTCCACGACCTCCGAGGCTGGTGACCACC
CTTGGGCTGGGTTCACCTCCGTGGGATCTGCCGCCAAGCAGCAGCAGCAGCACTCCAACA
ACTCGTCCACGTCTTCACTAACCTCAGCCCAGACTGCTGCTGCTGGCGCAGGAGCCCAAA
AGGCGGCCCAGGCCCAACAGGCTGCTCTGGCACACAACCGGGCCCTCAAACCCGTGTCGT
CGCCTAGCACCAACGCCAACGCCAACCACAGTGCCAAAAAGCCAGCCTACCAGTACATTG
TGCAGCCAACTCCTGCAAAGCCGCAGCAGAGTGCTGCTACCCGAGCTGCTCTGGCCAAGT
CCAAGCAGCTCAACGACCGAACCAAGGCCAAGAGACAAGCCGCAGCCTCGGCACAGAACC
GGACGCGCCAGGTACACACTCCTCCCGCCCAGGGACGGCCAGCACAGCATCAGCAGCCCC
AGGGAGCTAAGCAGATTCTCAATGCAAGCGGAGGCCGCCAAGAGTCACCGTCTCCAGAAC
AACAAGAGGAGGAAAAGAAACCACTGACTGAGTGGGACAAAAAGGTGGCAGAAATTATGA
AGGATCTACGAGGAGTGGACGAAAACGCCGCCAAGCAGATTCTCAACGAGATTGTCGTGC
AGGGCGACGAGGTTCATTGGGAAGACATTGCAGGTCTGGAGGCCGCCAAGAGTTCGCTCA
AGGAGACGGTTGTGTATCCGTTCCTGCGACCCGATCTCTTCTCTGGTCTGCGAGAGCCCG
CTCGGGGTATGCTTCTTTTTGGACCTCCCGGTACCGGAAAGACCATGTTGGCTCGGGCTG
TGGCCACCGAGTCCAACTCGACCTTCTTTTCTATTTCCGCTTCTTCTCTGACCTCCAAGT
TTCTCGGAGAGTCGGAAAAGCTCGTCCGAGCGCTGTTTTTCATGGCCAAGGCTCTGGCCC
CTTCTATCATTTTTGTCGACGAGATCGACTCGTTGCTGAGTCAGCGAAGCGACTCGGGCG
AGCATGAGGCGTCGCGACGAATCAAAAACGAGTTCCTCGTGCAGTGGTCCGATTTGGCTT
CAGCAGCCGCAGGCCGAGAACGAGAAGGTGACGTACAGCGAGTGCTTGTTCTTGCAGCCA
CCAATTTGCCCTGGGGCATTGATGAGGCTGCTCGGCGACGTTTTGTGCGACGACAGTACA
TTCCCCTGCCTGAAATCGAGACTCGAGAGGCGCAGTTCACAAAGCTATTGGCTGCCCAGC
GGACCAATCTCTCCGAGGAGGAGCGAAAGGGTCTGTTGCAGCTGACCGAGGGCTTCTCCG
GATCCGATATCACCGCTCTGACCAAGGACGCCGCTATGGGTCCTCTGCGAGCGCTGGGAG
ACAAGCTGCTGACCACTAGCCGGGAAGATATCCGTCCCATTGGATACCAAGACTTCATTT
CTTCATTAGCCTTTATTCGGCCCTCAGTGTCCAAGGAAGGCCTCAAGGCCTTTGAGGACT
GGGCTGCAGAGTACGGTAGCAGTGGTGCTTAGGCAATATTTTCATATATTTTCATTTCAT
AATATTAATGCATGGATAGACGGATAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20834g_CDS-001

Protein length: 1051 aa.
Product: Conserved hypothetical protein

>YALI0B20834g_CDS-001 MANYSLFGGPTQLQQQLQNIYDDAHEGTLQAVLLETAQQDGPALQAWTLCLFSINAKIKQ
VENSKPRSDTERGLLNSILELEQECRERIGNLERKKQVSTNPYVTQASLPSLNNLSLGNS
SAPVPPSHGASSSNIHNPFQGYDSRQQQQQQQVPPQVRPYYQTQQSQQSLQPALQPQHSN
PSSSSVNRYNVPRKQVPGSSSNINTSPQKPQLLDLDLSPGKNDTPKTSNLLAPPVDFDRP
KPVVAPVQTQYQYPPQQDFQPVEPEVRKERYEDRSQERQYNSADFTPISAHQRSTSSSST
VYTPVNSRPDLQPLSSASSPIDAPPSPPKREMLKTLRGATSSKKQPSASTANEAPLKGAS
LAWKFKNFGKSQEDKKPEQPKPAKVKPTRSNAPSVSSQATRPNYSTTSVNTTTNTTTSSI
PQSTKSNNIKSMLLDDDEPAPVRQAPAPVQQQQPAAAVQPPAPAAHPVHPVHPVHTPPPA
HTHSPPPHVTHAPPPTKQTPTAHQATYNALHGQARRSGEVRRSGEMTRRSGENRRSGEIR
RARPTSGISVRSTTSEAGDHPWAGFTSVGSAAKQQQQHSNNSSTSSLTSAQTAAAGAGAQ
KAAQAQQAALAHNRALKPVSSPSTNANANHSAKKPAYQYIVQPTPAKPQQSAATRAALAK
SKQLNDRTKAKRQAAASAQNRTRQVHTPPAQGRPAQHQQPQGAKQILNASGGRQESPSPE
QQEEEKKPLTEWDKKVAEIMKDLRGVDENAAKQILNEIVVQGDEVHWEDIAGLEAAKSSL
KETVVYPFLRPDLFSGLREPARGMLLFGPPGTGKTMLARAVATESNSTFFSISASSLTSK
FLGESEKLVRALFFMAKALAPSIIFVDEIDSLLSQRSDSGEHEASRRIKNEFLVQWSDLA
SAAAGREREGDVQRVLVLAATNLPWGIDEAARRRFVRRQYIPLPEIETREAQFTKLLAAQ
RTNLSEEERKGLLQLTEGFSGSDITALTKDAAMGPLRALGDKLLTTSREDIRPIGYQDFI
SSLAFIRPSVSKEGLKAFEDWAAEYGSSGA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG