YALI0B20504g

Overview

Description similar to uniprot|P07280 Saccharomyces cerevisiae YOL121C (ohnolog of YNL302C) RP55A 40S small subunit ribosomal protein S19
Locus type CDS
Locus tag YALI0B20504g

Location

Species Yarrowia lipolytica Positions 2702677..2703349
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 673 (nuc.)
Previous locus YALI0B20482g Next locus YALI0B20515r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20504g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20504gYALI0B20504g_mRNA-001YALI0B20504g_CDS-001

Nucleotide sequence

 

>YALI0B20504g
ATGACTGGTGTTTCCGTTAGGTGAGTGGAAATATGGGGATTTTGGACTTCACGCAAGTGA
TTTAAAGACAGTGAGTTGTTTCAGCTTCAATCTGGAACTGTCTCTGGTGCGTTCACACGA
TACACCTCAACGATTCTTCTTTTTCAGTACTAACAACAGAGACGTTCCCGCTCAGAAGTT
CATTGAGGCTTACGCTTCTTTCCTCAAGCGACAGGGTAAGCTTGAGGTCCCCGGCTACGT
TGAGATCGTCAAGACCTCTGCCGGCAACGAGCTCCCTCCCCAGGATGCTGAGGGATGGTT
CTACATGCGAGCTGCCTCCATTGCCCGACACATCTACCTGCGAAAGGAGGTTGGTGTTGG
CAAGCTCAACAAGCTCTACGGTGGTGCTATCAACCGTGGCCAGCGACCTTCTCACCACAA
GGACGCCTCCGGCTCCGTCAACCGACGTGCTCTGCAGGCTCTTGAGAAGCTTGGTGTCCT
TGAGGCCGGTCTCAAGGGTGGCCGACGAATCTCCGAGAACGGACAGCGAGATCTTGACCG
AATCGCCGCCCAGACTCTCGAGGAGGAGGAGGATGACGAGTAAATTTGATACTTGTCGGA
TTCACAAAATAAAATGTATTTAACAAAAAATGTATAGTACAGCCAGTGGGAGCACTGCGA
GTGCGTAGCACGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20504g_CDS-001

Protein length: 148 aa.
Product: Ribosomal 40S subunit protein S19, putative

>YALI0B20504g_CDS-001 MTGVSVRDVPAQKFIEAYASFLKRQGKLEVPGYVEIVKTSAGNELPPQDAEGWFYMRAAS
IARHIYLRKEVGVGKLNKLYGGAINRGQRPSHHKDASGSVNRRALQALEKLGVLEAGLKG
GRRISENGQRDLDRIAAQTLEEEEDDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG