YALI0B20174g

Overview

Description similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
Locus type CDS
Locus tag YALI0B20174g

Location

Species Yarrowia lipolytica Positions 2652502..2653683
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1182 (nuc.)
Previous locus YALI0B20130r Next locus YALI0B20196g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20174g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20174gYALI0B20174g_mRNA-001YALI0B20174g_CDS-001

Nucleotide sequence

 

>YALI0B20174g
ATGCTTCTATCTACTCTCCTCCTTTCTACTCTGGCTGCCACAGTTTTTGCAGCTCCTACC
GCTGCCAAGGTAGTGGCTTTGCCAGTGACCAGACACCACAACACCACTCGTCACCCTGCT
CTTTCAAAGAGATCCTCAACCTACCAGATCCCAATCACCAACAAGGAGTACTACTACTCC
GTTGCTCTGTCTCTGGGAACTCCTGCTCAGGACTTTAACGTGATTCTGGACACCGGATCT
TCTGACCTCTGGGTGTTCGCATCCAACGCTACACAGTCTTGTGAGAACCACGCCTGTGAC
TTCACCGGCCAGTTCAATGCCCTCGACTCTTCCTCCTACCATTTCATTGGAAATAACTAC
TCTATCGAGTACGTCTCTGGTGATAATGCTACTGGTAACTGGGGAACTGACACTCTGTCC
ATCGGGTCGGTGAAGCTCGAGAACCTCCAGTTTGCTGCTGTAACTCACACTTCTGCTCAG
AGCGGTATCCTTGGAATTTCTCTACAGGGCTCTGAGTCTGTTGTGTTCGTGAAGAACGAG
TACCCCAATTTCCCCGTTCAGCTCGTCAACCAGGGATGGATTGACCGAACCGTCTACTCG
CTTTACCTGAACTCCATTAATGCTACTGAGGGTACTCTGTTGCTAGGAGGCATTGATACG
GCTAAGTACTCTGGTCACCTGGAGGTGCTGGACCTGGCTGACCACGACGACTTCTCCGTT
CCCTACAGCGACGTGTCTTGGAACGGAAATTCGTATGGACGAGCCAGTGCTGCTGTTTTT
GACTCTGGAACCTCGTACATTTATATGCCCAATGATGTCTTCTACGGTCTGTCCAGTGAT
ATCAACCTAAACGAAACTACCAATGCTGACACCAACTTGCAGTACATCGCCTGCGATGCC
GATATCAATGTTGTCGTGACATTTGGAAACACCGACATCACTCTTGGAGCTGACCAGCTC
GTTCTTCACCTATCTGAGTTGCTTGACGATAAGACCCAGACAGAGTGTGTTTTTGGCATC
CAATCAACAGATTATTCTAGTGATAACATTCTGTTTGGCGATGTGTTCCTCAGATCTGTA
TACGCCGTTTACGATCTCGACAACTACCAGATCGGTGTCGCTCAAGCTGTCTACACTGAC
GAGACCAACATTGTTGCTGTTGGAGCCAATGACAACATCTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20174g_CDS-001

Protein length: 394 aa.
Product: Aspartic protease, putative

>YALI0B20174g_CDS-001 MLLSTLLLSTLAATVFAAPTAAKVVALPVTRHHNTTRHPALSKRSSTYQIPITNKEYYYS
VALSLGTPAQDFNVILDTGSSDLWVFASNATQSCENHACDFTGQFNALDSSSYHFIGNNY
SIEYVSGDNATGNWGTDTLSIGSVKLENLQFAAVTHTSAQSGILGISLQGSESVVFVKNE
YPNFPVQLVNQGWIDRTVYSLYLNSINATEGTLLLGGIDTAKYSGHLEVLDLADHDDFSV
PYSDVSWNGNSYGRASAAVFDSGTSYIYMPNDVFYGLSSDINLNETTNADTNLQYIACDA
DINVVVTFGNTDITLGADQLVLHLSELLDDKTQTECVFGIQSTDYSSDNILFGDVFLRSV
YAVYDLDNYQIGVAQAVYTDETNIVAVGANDNI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG