YALI0B20196g - ELO1

Overview

Description uniprot|Q6CDY7 Yarrowia lipolytica YALI0B20196g ELO1 Fatty acid elongase required for sphingolipid formation, putative
Locus type CDS
Gene name ELO1
Locus tag YALI0B20196g

Location

Species Yarrowia lipolytica Positions 2655427..2657107
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1681 (nuc.)
Previous locus YALI0B20174g Next locus YALI0B20207r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20196g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20196gYALI0B20196g_mRNA-001YALI0B20196g_CDS-001

Nucleotide sequence

 

>YALI0B20196g
ATGAGTGAGTATTTCCCACAAAACAAATGCCCCCAGCAGCGAACACGCCCCGACACCGAT
ACACGCAGCAGCGCGGAGGTGACACAAATGCCTCGGATTTGCACCTGTGATCATGAACAC
GTTACGTCGACATGGGACACACGTCCTGTGTAATCGACCATTCAGTCAACGAAACAGATG
TTTTAGGAGGACACCTCGAGCCAGAAGATGATCGACCGGGGATACTACCGGTAGTTGTGT
CACCAACACTCAGCTCAAGCGCTGTTATCGTCGTCGCGGGGTGATTTGACCCCTGATCTA
CGCGTCGCGTACAACAAAACGTGGCAGATTTGGGGTTTAATCGCCGGACAACAGAAACGA
ATACGCAGAGACAGTAACGGATGGATAATACAAATCCTACCTCGCCCCTTGATCTATCTA
CGTCTCTCACATGTCGCATGATCCATATCGTTACTTCCGATCTCATGTTTGACAAAATCC
ATACAAGGCGAAGTGAGGCAAACCCCGAACATATACGTGACAACAAGCCTCGTGTCACTA
CTATGTGGTGGCCGCCACAACACTGACGTGACGTCCTTTTTGGGACACGACCTCTGTCAC
ACCTTTACTATCCGCTCTATACTAACTCAGGCGCCGTCCCTATTGAATTCAACGTCCCCT
CCGTGGACCGACCCTTTGGTATCTACCTCTGGGCCATCTTTGACCAGGCCTGGGAGAAGC
TTTTCGGCTGGCCCGCGTCCTCTTTCATTTTCGTGCGAAATGACCCCAACATCCCCTTTT
CCTCTACCCCTCCCGTGATCATTGCCATCATTGTGTACTACATTGTCATCTTTGGCGGCC
GAGAGGTGATGCGAAACCTGTCTCCCATCCGACTCAACTGGCTCTTCCAGATCCACAACA
TCTTCCTCACCCTTCTGTCCGGTATGCTCCTCCTCCTCCTCGTTGAGCAGCTCTTCCCCA
TCATTGTCCGACAGGGTATCCTCTACGCCATCTGCGACTACGGATCTTGGACTCAGCCCA
TTGTCTTCTGCTACTACCTCAACTACCTGACCAAGTACTTTGAGCTGATCGACACCGTTT
TCCTTGTGCTGCGAAAGAAGAAGCTGACTTTCCTCCACACCTACCACCATGGTGCCACTG
CTCTTCTGTGCTACACCCAGCTCATTGGTAAGACCTCGGTCTCTTGGGTCCCCATCACCC
TTAACCTGTTTGTCCACGTTGTCATGTACTTCTACTACTTCCTGGCTGCGCGAGGTATCC
GAGTGTGGTGGAAGGAGTGGGTCACCCGGCTCCAGATCATCCAGTTCGTTATCGATCTTG
GATTTGTCTACTTTGCCTCTTACACCTACTTCACCTCTACCTACTGGCCCTGGATGCCCA
ACATGGGCTCTTGTGCCGGCGAGGAGTTTGCTGCTATTTACGGCTGTGGTCTGCTGACCT
CTTACCTCTTCCTCTTCATCGCCTTCTACATCAACTCTTACCGAAAGCCCTCTTCCAAGG
GACCTTCCAAGCCTGTTGTTGCTGTCGATGGCCCTGTTGGCGGCGTCAACGCCCAGACTG
GTGCTTCTCGAGGCCAGACCACTACCCGATCTCGACGAGCATAAAGAGGGGTATGAACAG
TGATACAAAAAAGCAGTTTTTACTGTAGTAGATTAGATAATAAATGCTCTTTCGAACAGT
C

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20196g_CDS-001

Protein length: 326 aa.
Product: Fatty acid elongase required for sphingolipid formation, putative
Gene: ELO1

>YALI0B20196g_CDS-001 MSAVPIEFNVPSVDRPFGIYLWAIFDQAWEKLFGWPASSFIFVRNDPNIPFSSTPPVIIA
IIVYYIVIFGGREVMRNLSPIRLNWLFQIHNIFLTLLSGMLLLLLVEQLFPIIVRQGILY
AICDYGSWTQPIVFCYYLNYLTKYFELIDTVFLVLRKKKLTFLHTYHHGATALLCYTQLI
GKTSVSWVPITLNLFVHVVMYFYYFLAARGIRVWWKEWVTRLQIIQFVIDLGFVYFASYT
YFTSTYWPWMPNMGSCAGEEFAAIYGCGLLTSYLFLFIAFYINSYRKPSSKGPSKPVVAV
DGPVGGVNAQTGASRGQTTTRSRRA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG