YALI0B20108g

Overview

Description weakly similar to uniprot|Q05518 Saccharomyces cerevisiae YDR348C (ohnolog of YHR097C) Protein of unknown function; weakly similar to uniprot|Q05518 Saccharomyces cerevisiae YDR348C (ohnolog of YHR097C) Protein of unknown function
Locus type CDS
Locus tag YALI0B20108g

Location

Species Yarrowia lipolytica Positions 2647014..2650166
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 3153 (nuc.)
Previous locus YALI0B20086g Next locus YALI0B20130r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20108g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20108gYALI0B20108g_mRNA-001YALI0B20108g_CDS-001YALI0B20108g_mRNA-002YALI0B20108g_CDS-002

Nucleotide sequence

 

>YALI0B20108g
ATGTCTACAGCCCCCCCAATGCACATTCCCGGGGCTCGGTTCAGCTCGGCCACACCGCCG
CCCATGTCCCCTAATACAACGGGCTCCAAGAACCCGTTTAGACGGACCGCTTCCGACTCG
TCGCAGGGAAGCGGATCGGTTCGACATAGCTCATACGGCAGTCTGCAACCGCCCACGATC
CGATCTGTGTCGGATCAACGCAGCAACTCGCCTTTTTCTGAACCTGGCGACATCTGGGAG
ACGCGGGTTGCTTCTCCTTCCTTTGATAAGTGAGTATTGTGATTTCACCAATGGTTCGGC
GTTATTATGACGGTTTCATGGTTATGATGACTGGGTTTGGAGAGATGGTTACATCAGCCA
TGCAGAGACAGTGAACGGACCCCCACACAGGTGTAGTGGTGCTGAAGCGGAGACTAATGA
CGACTCTGTTTTATCAGCTGTGTCAAACGAAGTCCACATTTATGGCTTTTACTGATAAAT
CGTGTTAACACGGCTTAGTCATGTTAATCTCTACACCAGACCACAGCACCACATACATAC
AGAGCGGGGATCGTGTGGCAAATTGGTCTAAAAACAAAAAAAAGAATACGGGAATGGAAC
CGGATGACAGAAGCGACACAAAGGGAACACGCGCACGAATTAAATGACGACAGATGCACC
TCGTTGCTCGTAGGGTTCACTTGCTGAGCGATTAAGCCCTCTAACATATCAAAGTATGAG
CATGGCAACCCAGTTTGAGGCAATCGATCTTCTGCTGACGGATTCGGATAGCGCAGACTA
CAGACTTGGAGTATGGCACAGCAAAGCAAAGCAAAGGAGGGGGGGAGAGCAACGAACACA
CAAAGCCAAGGGTGCCACAACACACTAAATTCAGCTGACGTCTACCATGGCACGCGGCAC
AGGTGAGTTTGTGGGCTACTTATATGATACTTGGCGCGTCCACAGCAGTGGTGTGTGCCA
ATTCTGTGTGTGGCGGGCTGTGCGCTGGTGATTATGTTCGCGTTCGTGTGGTGTTAGTCA
CGTGATCTCTCTTCCCCGGACTGAGGCTGTGTGGCAATCTCCATGCGTCATGTGGTATTA
TGTGTGGCGTGGTCGTCTTTGCTGTGTTCTCTTCTTGCGGGTGTCTGTGTTCTGTGCTGT
GTGCGTGTTTTACTTGTTAGGAAGGCGGTCCATTTGGGCTCAACACCACACTACAGTTCA
CAGTTCATAGCCAGCAATTGCAATCCAATCCAGTGTGCCGCAGTGTGCATACCGCCTCAG
CTATAAACACTGCCCTCTATAGCCTTCCGCTTCGCCGATTCCTCCGTTATCAAGCTCCAT
TTATGGCTTCCTCGCTACACTGCCTCATTCACTCGCCCTCCTGGTGAAGGTCTTCTGCCC
CTTTTTTGCACATCGCATGCTCCCAAAACCTTGTTGCGCCAGCCATGTTGTGAAGTGTGC
GTGTGTGAGAGTAGAGTGTGTCGTCTCACCGCACTCTAAACTAAACGCAGCATTACTTTT
GGTTTTGGTTTTGGTTTTCACTTTCTGGCAAGAAAATACCTCTATCTCTTCTCCAACCAC
TAACGCAGCCGGAGCTACGCCGCGCCCAACCGCAACAACAACAACCGAATGTCGCTCAAC
CCATTCCTGGCAGACCTGTCTCCCCAGGACCCCGCGTACCCCAACCCTGACCTGCCTGTG
GGCTCGCCCTCCGCCAACTCTAACGTTGCAGCAACCGCAGACTGGGCCTCGTCTCAGCCC
TCCTCTGCTCCCGCCTCACGAACGCGTTTTCGCACCCCTCAGCAGCAGCAGAACTCGCGG
CCCGTGACCTACTACGCCACTGAAGACAACAAGGACAGCGACTTTGCTATGTCCAACCGT
ACCACCAACCGACCTCGCTCGTCGTCCGACCTCCAGGGACGTGACCTGCCCAGCTACGAC
GACGTGCTCCACGATGCGCCTCCCCGAACCTTTAAAAACGAGTACGGCAGAGGCGACGAA
AAGGATAACGAGAGAGGAGCTCCTCCACCTCCCCGTTCTCGACGAGACCACTCGGGAGGC
ACCCACTCGTCGCAGACCCGTTCGCATTCACACTCGCACTCGCGTGAGGAGCGCCAGCGG
TCAGGACGAAAGCCAGAGACCCCTGAAGAACGACGTGCTCGGAAGGAACGAGAGTACGAA
AAGTTCAAGCGGTACCAGGAGCGAAAGGACCGTGAGGCTGCCATTGCAGCTGGCCAGAAG
CCCAATGGCCGTCTGTCCAAGACCGGCCAGCCTCTGGACACCATCGACAAGCTCGATGTG
ACGGGCTTTGGTTTTGGCTCTGGCTTCCACCACGACGGTCCCTTCGATGCTTGCAGACCC
CACAGAAACAAGGGCACCAATTTCAAGGCACCCGTGGCGGCCTTCCCCGTCAATGGCGCC
AACAATGCTCTGGGCCCCGCCAAGCCCTCTGAAGAACAGATTGACGCTTGGGGACGAACA
GAGACAGAGGCATTTTCCGACTTTTCGGCGCCCCATATGGCTCCCTCGGGGCCCCAAGTG
CAGAGAGCCGAAGGCAACACCCGATTCGATCCCACTAACAAGGCCGACCAGGTGCACGGA
ACCGCGTCGCAGGGACTCGGCACATCAACGTTCCTGGACGGTGCCCCAGCATCACAGGCT
GACATTGAGGCGTCATATCACCAGGACAAGAACTCTGGATTGGGCCGAAAGAAGTCGCTG
GTGCAGCGGGTGCGTAAGGGAGTCACTGGATCCGACTCGTCGCCTCCCCCTCGACCAAAC
GACTCGTCCAAGGGTGTCTACCGAACATACTCGAATGATAGTGACATGAAGGGAGGCAAG
GAATACTATGGAGAGAAGGCGGTGTCGCCAGAGAGCAACGGTCTCCTGAGACGAGTCAAG
AGTCTCAAGGTGAGAAGAAGGAGTTAAGTGAGCACACCACAACGTCTGATTCACACCCAC
AAGCACGCAACAGCTAGTGCTGAGTGGTCAGACCACAACAACTTGGTTGTCTCCCGTGGC
GTGCTTGATCAGTTACCGGTTAACTAGATCAATTGCCCTCGACCCACAACCTGCACAATT
ATGACCTAGAATTCTAGAGTCTCGATATCATGTAATGAGTATGTAGTTATAGAGTGTTTG
ATGGAAGATAAGGAGAAGGATATGATTATTTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20108g_CDS-001

Protein length: 483 aa.
Product: Conserved hypothetical protein

>YALI0B20108g_CDS-001 MAQQSKAKEGGRATNTQSQGCHNTLNSADVYHGTRHSRSYAAPNRNNNNRMSLNPFLADL
SPQDPAYPNPDLPVGSPSANSNVAATADWASSQPSSAPASRTRFRTPQQQQNSRPVTYYA
TEDNKDSDFAMSNRTTNRPRSSSDLQGRDLPSYDDVLHDAPPRTFKNEYGRGDEKDNERG
APPPPRSRRDHSGGTHSSQTRSHSHSHSREERQRSGRKPETPEERRARKEREYEKFKRYQ
ERKDREAAIAAGQKPNGRLSKTGQPLDTIDKLDVTGFGFGSGFHHDGPFDACRPHRNKGT
NFKAPVAAFPVNGANNALGPAKPSEEQIDAWGRTETEAFSDFSAPHMAPSGPQVQRAEGN
TRFDPTNKADQVHGTASQGLGTSTFLDGAPASQADIEASYHQDKNSGLGRKKSLVQRVRK
GVTGSDSSPPPRPNDSSKGVYRTYSNDSDMKGGKEYYGEKAVSPESNGLLRRVKSLKVRR
RS*

YALI0B20108g_CDS-002

Protein length: 536 aa.
Product: Conserved hypothetical protein

>YALI0B20108g_CDS-002 MSTAPPMHIPGARFSSATPPPMSPNTTGSKNPFRRTASDSSQGSGSVRHSSYGSLQPPTI
RSVSDQRSNSPFSEPGDIWETRVASPSFDNRSYAAPNRNNNNRMSLNPFLADLSPQDPAY
PNPDLPVGSPSANSNVAATADWASSQPSSAPASRTRFRTPQQQQNSRPVTYYATEDNKDS
DFAMSNRTTNRPRSSSDLQGRDLPSYDDVLHDAPPRTFKNEYGRGDEKDNERGAPPPPRS
RRDHSGGTHSSQTRSHSHSHSREERQRSGRKPETPEERRARKEREYEKFKRYQERKDREA
AIAAGQKPNGRLSKTGQPLDTIDKLDVTGFGFGSGFHHDGPFDACRPHRNKGTNFKAPVA
AFPVNGANNALGPAKPSEEQIDAWGRTETEAFSDFSAPHMAPSGPQVQRAEGNTRFDPTN
KADQVHGTASQGLGTSTFLDGAPASQADIEASYHQDKNSGLGRKKSLVQRVRKGVTGSDS
SPPPRPNDSSKGVYRTYSNDSDMKGGKEYYGEKAVSPESNGLLRRVKSLKVRRRS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG