YALI0B20086g

Overview

Description weakly similar to uniprot|P10662 Saccharomyces cerevisiae YDR347W MRP1 Mitochondrial ribosomal protein of the small subunit
Locus type CDS
Locus tag YALI0B20086g

Location

Species Yarrowia lipolytica Positions 2643791..2644981
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1191 (nuc.)
Previous locus YALI0B20064g Next locus YALI0B20108g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20086g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20086gYALI0B20086g_mRNA-001YALI0B20086g_CDS-001

Nucleotide sequence

 

>YALI0B20086g
ATGCTATCTCTTCGACGAGCTCTTCTGGTGCCCCGGCTGGGCCGGGCTCTGCACACCATG
CCTGCATACTCTGGCCTCGGCTCTCAGGCCGCTCCCACTCAGATCAACAAGTTTCTGTCG
GCCGAGACCGTCAAGTCTGCGTGGTTTGAACATCAGCACGAGATGCTGGAGCGAGTCAAC
GAGGGTCTGGCAAGCAGCGAGGAGCTGGAGGGTCTTGATCTGCAGAGTTTGGCTCTGGAA
ACTTGCAACCGGTCCGAGGATGCTCTCCACCACTTTGCTTCTGGAGCTTTTGCCAACGAT
TTCTTCTTCAAGGGTGTAGCTTCTACTGTCAAGCCCGGTGAGGTCTCTGAGCCCATTGAT
GCGTACCACGGACTCTACGTCAGCCCCCGAGACCCCGATTACCAGACTGTGATGCCTGCT
CTGGCCACCGGAGAGACCCCTGCTTGGGGCAACCACCCCGGCACTGACGATGCTCTGTAC
GACCTGATCCTGACGTCGTTCGGTACTGTGGAGGCCTTCCGAGAACATCTGCTGACCAAG
GCCGAGTCGATTTTCGGCAATGGATACACATGGCTAGTGCTGAGCAAGCACTCTGGCCGA
CTACATCTCGTCAACACCTACAACAACGGCTTCATCCAGAAGAAGGGCACCAACTCTGCC
GAGCTGGCTGCAGAGGCTGCTGCCAAGCGAGCCGTCGAGGCTGATGAGGCGAAGGCTCTG
GCTGAGCTCCAGGCCGAGGCTCAGAACAAGAAGCTTAACGCTCTGGAGGAGAAGCTTCTG
AAGAACAAAATCTACAAGATGGAGGTGGCCAAGCAGATGCGACAGGCACAGCCCAAGATT
CTGCACGATCTCAAGCCGCTGCTTAACGTCAACGTGTGGCAGCACATGTGGCTCAACGAC
TACGGCGCGTTTGGCAAGCGAAAGTACCTCGACAACTTCTGGGAGAAGATTGACTGGAAC
GTCGTCAAGGGACGACTCCAGGACCACTTTGAGAAGCAGACAGATCTTAGCAAGAGTGAG
CTGTTTGGACCTTACGTTTAAGGGGGTGTCACGCGATGGTGAAGTATGTAAATAGTGAAA
GATGTGCATAGACAAGTGCGAAGCATGATGCTATGTATGATGATATGAGAAGAAGACAGG
AGTATGAATCATGAGTAATGTGGAACTCTACGAATGCCAACGTGAATATTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20086g_CDS-001

Protein length: 347 aa.
Product: Conserved hypothetical protein

>YALI0B20086g_CDS-001 MLSLRRALLVPRLGRALHTMPAYSGLGSQAAPTQINKFLSAETVKSAWFEHQHEMLERVN
EGLASSEELEGLDLQSLALETCNRSEDALHHFASGAFANDFFFKGVASTVKPGEVSEPID
AYHGLYVSPRDPDYQTVMPALATGETPAWGNHPGTDDALYDLILTSFGTVEAFREHLLTK
AESIFGNGYTWLVLSKHSGRLHLVNTYNNGFIQKKGTNSAELAAEAAAKRAVEADEAKAL
AELQAEAQNKKLNALEEKLLKNKIYKMEVAKQMRQAQPKILHDLKPLLNVNVWQHMWLND
YGAFGKRKYLDNFWEKIDWNVVKGRLQDHFEKQTDLSKSELFGPYV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG