YALI0B19910g

Overview

Description weakly similar to uniprot|W6Z3R2 Bipolaris oryzae hypothetical protein COCMIDRAFT_104008
Locus type CDS
Locus tag YALI0B19910g

Location

Species Yarrowia lipolytica Positions 2621181..2623043
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1863 (nuc.)
Previous locus YALI0B19888g Next locus YALI0B19932r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19910g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19910gYALI0B19910g_mRNA-001YALI0B19910g_CDS-001

Nucleotide sequence

 

>YALI0B19910g
ATGTCAACACTCGAAGAGCTCAAAGTACTACGCAAAAAGTTGTCTGACGCGCTCAAACGC
AGCCAGGATGAAGCCAAGACGCAAAAAATCAAAGAAAACCTTGCCAAGGTGTACAAGAAC
ATGGCGTCCAAGGTGGCACCTACAGACTTCACCAAAGCCATTGAATACTCCAAGTACGTC
ATTGATCTGATGCCGACACAAAGCCCAGGGTACCTGACAATAGGCAAAATTTTGCAGGAG
AACAACAAGGATGACGCTGCTTTGAAGATGTACCAGATAGGGCTCAAACGGTGTCCTGAG
GACGACAAGTTGAGACATGTTCTCAAGAGTCAGATGGAAGTGGTTCAGAGGAGATTGGAT
AGCAGTTTTAAGCAGGAGAAACCGACACAGACGACCCAGAGGACTTCAAAATCGTCACTG
ACGGAAACAGGGAGTCTTACCGAAGTAACGCCAAAGACATGCATAGATCCTATGACCACT
TTACCTGCAGAGGTGGTGGAAAACATCTTCACGCATGTGCCGTTCCGCACCGTTGTGAGA
AGCATGCGTGTATCTAAGACATGGCAGACGACCATCGAGAGCATGCGTCATGTTTGGAAC
AGCCGGATCAACTTCTCTGCTGCTCCCAAGGACCGTCCTGTGTCCGTCAAGGCTATGGAA
CGGTACTTCAAGCTGGCCACCAAGGCATCCCCCACAACTGACTTGGACGAGCTCAAACAC
GCCAAAAACAACATCCGTGTCATTAACTTACTAGGCATGCATTCAAAGTCGCAGGAGTAC
GCCATCAATCAATGGCTGGGGGCTTTCTGGTTCTCCATCGAAAGGATTAATTTATCTTTG
GACGGGATCAACACCATCAAATTTGCATCTCACCTGAAGAAGCGAGCTGAATTGATTCCT
GAACACCGAGCTTCGCCATCGGATACCATCACACATCTCAAGCTGTTCTCAAGCTCTACC
AATGTAGATGCTCTTGTCAGAAACATCATCACGTGTATGCCTAAACTTATATCCTTGGAA
GTTATCAACAATCACAACCAGAAAACGCTCAACGTGGTCACCCCAGAGCCCTTCAAGGCT
CCTCTCCCACTTTCCCATCTGAGAGTAGAAGATAATACCATTCCTCCTCGACTAGGGGCA
ACCTTTGCTCCTAACGCATACAAAGAGATCGCCAGCATCGTCGAACACTGTTCAGACACA
CTGACAGGTCTATCACTGTCGGCCATTCCTATCGAATACACAAGGCCGTTATCAAAGCTG
ACACATCTGGAATTGGCAACAAGTAACCATCTGATGGAGATCCGCTACCTTCCCAACTTC
ATGGCCAAGCTGCAACACGTGAAGCTTGACAACCATCATACCCCGCATTTCCTTAACTCG
TTGAACAAATCAACATCCCTGCATCAGCTAAAATCTCTGCATTTGGACCTCCTTGGACCT
CTGAAGCTTGGATCTACCCTTGTTCCTTCCCGAGTCCATGATCTGTTCAACCTGTCTCTA
CCCAGTCTCGAAACACTGAGCTTTACAAACTACATGTCTAACATTGTTCCTGGCTGGTTT
GAGCTGCTCACAGACCGTCTACCCACCCTCGTTCACCTTGATCTGACAAACTGCAAGCTT
GGAGACATTGAGATGAACGCTCTCACCAAAAGGAACAAGCTAACCAACCTGGAGTTCATT
GGATTGAAAGATACACAGGTGACTGGACCTTCTTTAATTGCTCTGGCTAAACGCAAAGTC
GGTATGGACGTCACTGGCCTGGATATGCGAACAGACACTTTCAGGTGGTTGGCTTATGAG
AGTGGAGTCACTGTGAAGAACGACCAGAAGTAGTAGTATATAAAGCAATTAGTTTCATTA
ACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19910g_CDS-001

Protein length: 611 aa.
Product: Conserved hypothetical protein

>YALI0B19910g_CDS-001 MSTLEELKVLRKKLSDALKRSQDEAKTQKIKENLAKVYKNMASKVAPTDFTKAIEYSKYV
IDLMPTQSPGYLTIGKILQENNKDDAALKMYQIGLKRCPEDDKLRHVLKSQMEVVQRRLD
SSFKQEKPTQTTQRTSKSSLTETGSLTEVTPKTCIDPMTTLPAEVVENIFTHVPFRTVVR
SMRVSKTWQTTIESMRHVWNSRINFSAAPKDRPVSVKAMERYFKLATKASPTTDLDELKH
AKNNIRVINLLGMHSKSQEYAINQWLGAFWFSIERINLSLDGINTIKFASHLKKRAELIP
EHRASPSDTITHLKLFSSSTNVDALVRNIITCMPKLISLEVINNHNQKTLNVVTPEPFKA
PLPLSHLRVEDNTIPPRLGATFAPNAYKEIASIVEHCSDTLTGLSLSAIPIEYTRPLSKL
THLELATSNHLMEIRYLPNFMAKLQHVKLDNHHTPHFLNSLNKSTSLHQLKSLHLDLLGP
LKLGSTLVPSRVHDLFNLSLPSLETLSFTNYMSNIVPGWFELLTDRLPTLVHLDLTNCKL
GDIEMNALTKRNKLTNLEFIGLKDTQVTGPSLIALAKRKVGMDVTGLDMRTDTFRWLAYE
SGVTVKNDQK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG