YALI0B19888g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0B19888g

Location

Species Yarrowia lipolytica Positions 2619075..2620307
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1233 (nuc.)
Previous locus YALI0B19866g Next locus YALI0B19910g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19888g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19888gYALI0B19888g_mRNA-001YALI0B19888g_CDS-001

Nucleotide sequence

 

>YALI0B19888g
ATGCAGGTGGGAAATTTTGATAAGGCGCGTGAGAATCACCACTTGACAAAACCCACATTC
ACTCCACCACACGCAGAAAATCTCCAATATATCACACACAACATGGCGGGATTATCGGCA
TCCAGATGGGCGAAAAAGGCGGCAGAGCTGAAGGAAGCAAACGCCGCAAGCAACACAGAC
AAGAACAACAAAACTGAGAACTCGACAACATCAGCAAAATCGGCTGCCTCGCCCTCCAAA
AACGACAGACCAGTATCCTCTTCGACAGTCTCTGTCTTTTCAGAGAAGGACTCGTCAGAG
TCCGACAGCGACGTTGACAACTCGTCGACCATGTCGCCAGCAGCGATGGCCTTTGCTGCT
CGTCTTAGTAAGCCTGAACCCAAGAAGGAGGAAGAGCCACATACGCCGACCACCAGTCCC
CGGAAGACCCTGGGCCAGTCACGATGGGCCAAGAAGAGCGACGCAAAGATTGACACAAAG
ACAGACGCAAAGACAGAGACAAAAATCGACCCCAAGGATGTGCCACTCATCAGTACGCCT
CCCAAAGGTCCTGCTTCCGAATACAAAAAGAACGGCTCTGTATCTGCCAACGATCTTCGA
TCACGCCTAGCACCTCCGTCAGCACGTGTAGCTCCGTTCGAGACTGTTCCCGACGATGTG
GCAAAGCAGCAGCGACGAGAACTACGTGAGAGAGAGCGGGAGACCTATCGACAGAAGAAG
ATGGGCCACACTCGTGAATGGGATGAAAGCCAGACCCAGCCTCAGCACAATGGCCATAAC
GGCCACAACGGCCATAGCGGCCATAATAATGAGCCCAAAGAACGACGCAACTCTCGAAAC
GGTCACGTCAGACGGGACTCGATGAACCACCACAAACCCGACCACCACTCAAAACTGGAC
GCGCGGTTCGAAAAGAAACCAAAGGGACGGCTGCCAGAGCGACAGGAACGCCCAGAACGA
CAGGCACCTAAGAAACAGGCGCCTACTCCTGCTCCTGCAAAGACAGCTGCTTCCTCAAAA
CCCAAGGAGCCAACTGCCGAGGAGAAGGAGGCTCTGCGAATCAAGTTTGAGGAGCACCTC
AAGCTATCCGAGTCCAAAAACTTTGCCTGGGACGATGACGAGGATGACATGTGGGCGTAG
AACAGCTGCGATGAGACATTTACACGACACAAACACATTTACACAGAGACTGTATTATAT
ACGTAATTATAATTTATTATTGTAATATTTTCC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19888g_CDS-001

Protein length: 380 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0B19888g_CDS-001 MQVGNFDKARENHHLTKPTFTPPHAENLQYITHNMAGLSASRWAKKAAELKEANAASNTD
KNNKTENSTTSAKSAASPSKNDRPVSSSTVSVFSEKDSSESDSDVDNSSTMSPAAMAFAA
RLSKPEPKKEEEPHTPTTSPRKTLGQSRWAKKSDAKIDTKTDAKTETKIDPKDVPLISTP
PKGPASEYKKNGSVSANDLRSRLAPPSARVAPFETVPDDVAKQQRRELRERERETYRQKK
MGHTREWDESQTQPQHNGHNGHNGHSGHNNEPKERRNSRNGHVRRDSMNHHKPDHHSKLD
ARFEKKPKGRLPERQERPERQAPKKQAPTPAPAKTAASSKPKEPTAEEKEALRIKFEEHL
KLSESKNFAWDDDEDDMWA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG