YALI0B19844g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0B19844g

Location

Species Yarrowia lipolytica Positions 2615441..2616727
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1287 (nuc.)
Previous locus YALI0B19800g Next locus YALI0B19866g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19844g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19844gYALI0B19844g_mRNA-001YALI0B19844g_CDS-001

Nucleotide sequence

 

>YALI0B19844g
ATGAGTACCAGGTCCGGGATCCATACACTGCAAACCACCGCCATGTCAAAAACAACTACT
GCTACAGCTAGCTTGCCGCCTGACGTCATTGCCGTTGTTGCCCAGTACGTTGACAGCGAC
ACTCTGGTCGACATGAGCTGGGTTTGCAAAGACTGGAGATCTGCCATTACCGACCATCAC
TTCAAAGAGGCACTTCGAGACACAAACCCGCTGTTTCAAAGAAGTCTGACGTTCCGGAAA
ACCTTCAGAGACTGTGCATTGACTCACAGGGCTCGAATGAAGTCTGACAGACGACCTCTG
TCCACACCTCTGAGCCTCGATTGGAGCTTTTGTGAACACAAACATGACCAGAAGCTTCCC
TGGGACTTCTACTGTCTAGGCAAGTTTCGAGCCCAGGATATCGAGAACGTCTACTCTGTC
TCCTGCTTAGATACCCACAACTACGGCCTGCATGACTCAACGCGGTTTCGAGTGGCTCCT
CTTACCATCAACCTTTACAATGAGCAATGGTGGATAGACACCTTGTTTGAAGACGATGTG
TACACGGGTCAGTACGGACTGACAATCCATCACGAAGGAATAGCAAAAAACTTTCACATG
ATTGCGTCGACTCCTGAAATGCTAGTTGTGCTTATTGACGAGAAGAAACCCAAGATACTG
ATCAAGTATGCGGAGAGCCAGGAGACGACTTATGTGGTTGACGACTACAACAAAGATTTC
GACTCAGAGACATTTGTATTTGCAGCTGGATCAGTGGCTATATTCCGAACAGTAGATGAA
GATTTTATAGAGCAGTTTTACGTTCTGGCAGGTTCAGGAGCCACTCCTCTGTACAGTCGC
AAAAAGCCAGTCTTCAGGCGCATGTTCTACTTCATATACGACGGGACCATCTGGGAGATA
TTTGACCAGTTTCAGGAGGGCATGATGGTCATCCAGGACCTGTTCTTTAATCTTCCAAGC
ATGTCTTTCAAGTACGATACAAGCCATGACAAGAAGAAGTGGAAGGACTCCAACATCACC
ATGGACTATAACTGGTGGGCCGTGCATGACCCCTGTCAGAATTACAGATATGTGGTGATA
TACGGCGTCTATAACGCCAAGTACGTGATTGACATGCTGGAGAGGAAGGTGATCACATGG
GATTGTACCGTCACCATGAGCGACCGTCTGCTAGTAGGGATTTCACAGGGCAAAATTTGT
ATGCACATTTACAGTTACGATGTGCTGTATTCAATCTGGAAGGACGAGGTGGTGTATGAG
GATGGTGTTAGTCGGGTGGACCTTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19844g_CDS-001

Protein length: 429 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0B19844g_CDS-001 MSTRSGIHTLQTTAMSKTTTATASLPPDVIAVVAQYVDSDTLVDMSWVCKDWRSAITDHH
FKEALRDTNPLFQRSLTFRKTFRDCALTHRARMKSDRRPLSTPLSLDWSFCEHKHDQKLP
WDFYCLGKFRAQDIENVYSVSCLDTHNYGLHDSTRFRVAPLTINLYNEQWWIDTLFEDDV
YTGQYGLTIHHEGIAKNFHMIASTPEMLVVLIDEKKPKILIKYAESQETTYVVDDYNKDF
DSETFVFAAGSVAIFRTVDEDFIEQFYVLAGSGATPLYSRKKPVFRRMFYFIYDGTIWEI
FDQFQEGMMVIQDLFFNLPSMSFKYDTSHDKKKWKDSNITMDYNWWAVHDPCQNYRYVVI
YGVYNAKYVIDMLERKVITWDCTVTMSDRLLVGISQGKICMHIYSYDVLYSIWKDEVVYE
DGVSRVDL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG