YALI0B19800g

Overview

Description similar to uniprot|P19145 Saccharomyces cerevisiae YKR039W GAP1 General amino acid permease
Locus type CDS
Locus tag YALI0B19800g

Location

Species Yarrowia lipolytica Positions 2610180..2612057
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1878 (nuc.)
Previous locus YALI0B19778g Next locus YALI0B19844g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19800g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19800gYALI0B19800g_mRNA-001YALI0B19800g_CDS-001

Nucleotide sequence

 

>YALI0B19800g
ATGAACGACATTGAAAAAAACCAAGACGCCGCATCGGTGGCTTCCTACTCCAAGCAGGAT
GCTCCGGCTTATGACGATGAGCCCTCAGCCATCGGCTCTGTGCACGAGCACAAGGCTGGC
AAGTGGCAGAACTTCAAGGATTCGTTCAAGCCCGCTGATCTGTCGCAATACGACACCACA
GGCATGACCGAGGTCGAGAAGGCCGCCCTTGCTACTGCCAACTCTCCCCTGTCTCGAGGT
CTCAAGCCCCGACATCTTCAGATGATTGCTATCGGTGGTTCTATCGGTACCGGTCTTTTT
GTCGGTTCTGGAACTTCCCTGGCCACCGGTGGCCCTGCCGCTCTTCTGATTGCTTACGGT
ATCATTGGAGTCATGCTGTTTTGCACTGTCCACGCTCTCGGTGAGCTTGCTTGTACCTTC
CCTGTTGCTGGTTCTTTCGCTACTTACTCTACTCGATTTATCCACCCCGCTTGGGGCTTT
GCCATGGGCTGGAATTATACCATGTCCTGGTTTGTTGTGCTTCCTCTCGAACTTGTCGCC
GCATCCATCACAGTCAACTTCTGGCAGGACATGAACCACACAGATATTAACAACGCCGCT
TGGATCGCCATCTTCTGGGCCTTGATTGTCTGCATCAACTTATTTGGAGTTAAGGGATAC
GGAGAAGCCGAATTTGTCTTTTCTCTTACCAAGGTTGTTGCCATTCTCGGTTTCTGCATT
CTCGGAATCGTGCTGGTCGCAGGAGGAGGACCCCATCAGGGCTACATTGGAGGTAAGTGG
TGGCACCGACTTCCCGAGGGAACCGTCGGACCCCGAGGAGGAGCCTTTGCCCACGCGTTT
AAGGGTGTCTGTGCTACCTTCGTGTCTGCTGCCTTCGCCTTCACTGGAACTGAGCTGGTA
GGTCTGGCTGCCGCCGAGACCGAGAACCCCCGAAAGATGCTTCCCTCCGCCACCAAGCAG
GTCTTCTGGCGAATTCTCATCTTCTACATCGTCTCTCTTACACTGGTCGGTCTCCTTGTT
CCTTTCGATGAACCCCATCTTCTCAAGGGTTCTTCTTCCGTCGATGCCACTGCCTCCCCC
TTCGTCATTGCCATCCGAAACGCTGGAATTTCTGGTCTTCCTTCCGTTATGAATGTTGTT
ATCATGATTGCTGTTCTTTCTGTCGGTAACTCCGCTGTCTACGGTTTCTCTCGAACCATT
GCTGGTCTGGCTGCTATGGGCCATGCCCCCAAGTGGTTCGCCTACATTGACCGACAGGGA
CGGCCCATTGTCGGTATTCTCGTTGTTTCATTTTGGGGTCTGTTTGCCTTCATTTGTGCC
GCTCCTGTCGCTACCCAGAACGCCGTTTTTGGCTGGCTCATGGCTTTGTCTGGTCTCGCC
TCTATCTTCACTTGGGGTTCTATCAATCTCTGTCATATCCGATTCCGACTGGCTCTTAAG
AAACAAGGACGAACCACCCGAGAGCTTGTCTTCACTGCTGCACTTGGTATCTGGGGTTCC
GTTCTTGGTCTTACTCTCAACTGTCTGGTTCTGATCGCCCAGTTCTGGATCGCTTTGTTC
CCTATTGGAGCCCCCAAGCCTACTGCTGAGGCTTTCTTCAACGCTTACCTCGCTGCCCCT
GTCGTCCTCTTCTTTGCTCTCGTTTGGCTCGTCTGGAAGCGAGACCCTTGGCTCTCCATT
GACCAGCTCGATATCGATACTGGACGACGTGACACCGATCTGGTCAAGCTGGAGGCCGAG
CTTGAGCAGGAGCGATACGAGCTTTCCCAGCGCAAGTGGTTCTACCGAGTCTACAAGGCC
TGGTGTTAGAACGTTTCAAGAAATTTATTTCTTGGAAACACTCCTTTATTTATTATAATT
AATGATGTTTGAAAAAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19800g_CDS-001

Protein length: 603 aa.
Product: General amino acid permease, putative

>YALI0B19800g_CDS-001 MNDIEKNQDAASVASYSKQDAPAYDDEPSAIGSVHEHKAGKWQNFKDSFKPADLSQYDTT
GMTEVEKAALATANSPLSRGLKPRHLQMIAIGGSIGTGLFVGSGTSLATGGPAALLIAYG
IIGVMLFCTVHALGELACTFPVAGSFATYSTRFIHPAWGFAMGWNYTMSWFVVLPLELVA
ASITVNFWQDMNHTDINNAAWIAIFWALIVCINLFGVKGYGEAEFVFSLTKVVAILGFCI
LGIVLVAGGGPHQGYIGGKWWHRLPEGTVGPRGGAFAHAFKGVCATFVSAAFAFTGTELV
GLAAAETENPRKMLPSATKQVFWRILIFYIVSLTLVGLLVPFDEPHLLKGSSSVDATASP
FVIAIRNAGISGLPSVMNVVIMIAVLSVGNSAVYGFSRTIAGLAAMGHAPKWFAYIDRQG
RPIVGILVVSFWGLFAFICAAPVATQNAVFGWLMALSGLASIFTWGSINLCHIRFRLALK
KQGRTTRELVFTAALGIWGSVLGLTLNCLVLIAQFWIALFPIGAPKPTAEAFFNAYLAAP
VVLFFALVWLVWKRDPWLSIDQLDIDTGRRDTDLVKLEAELEQERYELSQRKWFYRVYKA
WC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG