YALI0B19118g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0B19118g

Location

Species Yarrowia lipolytica Positions 2529184..2530243
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1060 (nuc.)
Previous locus YALI0B19096g Next locus YALI0B19140r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19118g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19118gYALI0B19118g_mRNA-001YALI0B19118g_CDS-001

Nucleotide sequence

 

>YALI0B19118g
ATGGTTGCAGCAATGTTTGACGTCTTGGTCGCAGTTGATCTAGCACACGTCTCCACCACA
ACAGTCTCTCACACAATGGACATTCGATTATTTCCCGAGCAGCAGAGCGAAAAAAAGCCG
AACACGGTCTGTCACGTGCTGCCGTGCCATATCCACTACACAGGGCCTGCCAACGTGGCT
GAGTACTTCACCATCGAGGGTGGTGACAACAAGAACGGGCAACAGGTGGAAGTGACCAAA
GACGAAAAGGCTGACGAGAACCCGGAGGTTGCTAAGAAGGCCGAAGAGAATGATGCAGCG
AAAGAGCAGGGTGAGGAGGACGAGAAAGAGTTTGGATTGAACAACAGGGATTCAAAGGAT
CCAAAAGACAAGAGTGCCTCTTCAGCTCCATTGAGTACCCATTTTCGAGGCAGGAAGCTT
CATGGAGTGGAGCAGAATCTGCCCGAGACGTACCGTGGCTACAGGTTCACCGAGGGTACC
AATTTCTTCGAGAACTCGAACCCCGTGTCCCAGCTGGGCGACATCACCCAGGACTTTGAC
CAGGATGGATTCGAGCGAAATCCCGATGACTACCGAAACAACGAGCCCATCGAGATGCGG
TCGTGGAACGCCGAAGGCTCGTTCGATCATCTGGTCATCTGGGGCCATGAGCGGGTGCCC
GATCTCGCCAGTGATCAGTGGGCCTGTGGAGTGCGAGATTGGCACCAGGTTGCCACTGCC
ATGAACCCCATAAAGCAGTGAGAGTCAAGCAATGAGTACTAGGTATATTTTTCTGCTATC
GCTCGTGGTTGTGTGGTATTCTAGACTTTGCTGCTGGGAGACCATAATCTGTTGTTCTCG
TACATACTGAGGACCTGCAGATGCCATTGACCAGTTTGTTCTGACAGGCTTCCATTGCTG
CGATTATACAGCGACTACTGATGATAAATATGACAAGGATAGAGCGAGTTAGCTATATAA
GAGCCGGTAGGGAAGTTAAACGATGGATGGTTAGAATACAAGTCTGCATCTACTGTAATA
ACACACCAACCATAATAAAACATTGGAATATCGGTCCCTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19118g_CDS-001

Protein length: 247 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0B19118g_CDS-001 MVAAMFDVLVAVDLAHVSTTTVSHTMDIRLFPEQQSEKKPNTVCHVLPCHIHYTGPANVA
EYFTIEGGDNKNGQQVEVTKDEKADENPEVAKKAEENDAAKEQGEEDEKEFGLNNRDSKD
PKDKSASSAPLSTHFRGRKLHGVEQNLPETYRGYRFTEGTNFFENSNPVSQLGDITQDFD
QDGFERNPDDYRNNEPIEMRSWNAEGSFDHLVIWGHERVPDLASDQWACGVRDWHQVATA
MNPIKQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG